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Table 1 Statistical data of the RNA-Sequencing reads for six samples

From: Identification and characterization of long noncoding RNAs and mRNAs expression profiles related to postnatal liver maturation of breeder roosters using Ribo-zero RNA sequencing

 

Mature liver

Immature liver

 

M1

M2

M3

IM1

IM2

IM3

Q20 (%)

99.53

99.55

99.51

99.56

99.47

99.52

Q30 (%)

95.48

95.49

94.78

95.66

94.67

94.89

GC content (%)

51

52.5

50

50

51

50

Raw reads

85,224,338

90,000,000

76,894,960

90,000,000

89,618,576

90,000,000

Valid reads

73,446,942

78,312,446

66,231,654

64,371,012

56,267,806

66,562,834

Mapped reads

67,733,671

(92.22%)

69,790,614

(89.12%)

58,100,222

(87.72%)

55,492,843

(86.21%)

44,247,356

(78.64%)

53,016,014

(79.65%)

Unique genes

20,158

19,726

19,751

19,351

19,543

19,687

Unique lncRNAs

1918

1927

1932

2019

2042

2022