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Table 3 A summary of the average Qfit and RF similarity scores between the three suggested phylogenies and the underlying gene pool

From: Reconstruction of real and simulated phylogenies based on quartet plurality inference

 

Similarity measure

 

Average Qfit

Average RF

QP1 tree

0.48

0.42

COG tree

0.47

0.39

Ribosomal protein tree

0.48

0.42

  1. For each suggested phylogeny, the Qfit and RF similarity scores between it and each gene in the gene pool were calculated. The average similarity scores were subsequently calculated and presented. We see that the scores relating to the QP1 tree and the ribosomal protein tree are the highest
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BMC Genomics

ISSN: 1471-2164

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