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Table 3 A summary of the average Qfit and RF similarity scores between the three suggested phylogenies and the underlying gene pool

From: Reconstruction of real and simulated phylogenies based on quartet plurality inference

  Similarity measure
  Average Qfit Average RF
QP1 tree 0.48 0.42
COG tree 0.47 0.39
Ribosomal protein tree 0.48 0.42
  1. For each suggested phylogeny, the Qfit and RF similarity scores between it and each gene in the gene pool were calculated. The average similarity scores were subsequently calculated and presented. We see that the scores relating to the QP1 tree and the ribosomal protein tree are the highest