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Fig. 5 | BMC Genomics

Fig. 5

From: Nanopore sequencing and full genome de novo assembly of human cytomegalovirus TB40/E reveals clonal diversity and structural variations

Fig. 5

Structural variations of alternative contigs compared to the full genome construct. Green boxes represent sequence-divergent contigs sharing the same synteny with the full genome construct. Red (relocations) purple (local misassemblies) and orange (inversion) boxes represent misaligned contigs, which indicate the presence of viral quasi-species in the culture. Reads supporting some major rearrangements are colored, in the bottom IGV screenshots

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