Table 1 Summary statistics of clean reads in the transcriptomes of lotus
samples | Total Reads | Base number (G) | Q20 (%) | Mapped Reads | Exon (%) | Intron (%) | Intergenic (%) | GC (%) |
|---|---|---|---|---|---|---|---|---|
P1 | 48,494,178 | 7.27 | 97.30 | 41,774,628 (86.14%) | 73.63 | 9.21 | 17.16 | 44.93 |
P2 | 62,315,936 | 9.35 | 96.71 | 53,447,367 (85.77%) | 74.02 | 9.04 | 16.94 | 44.86 |
P3 | 58,545,264 | 8.78 | 97.28 | 50,620,458 (86.46%) | 73.79 | 8.8 | 17.41 | 44.68 |
Sp1 | 64,909,918 | 9.74 | 96.75 | 54,890,928 (84.56%) | 75.62 | 7.79 | 16.59 | 45.26 |
Sp2 | 63,780,056 | 9.57 | 97.01 | 52,759,965 (82.72%) | 74.94 | 8.32 | 16.74 | 45.22 |
Sp3 | 47,264,990 | 7.09 | 97.33 | 39,552,586 (83.68%) | 75.02 | 8.2 | 16.79 | 45.13 |
St1 | 62,630,786 | 9.39 | 96.65 | 52,672,417 (84.10%) | 75.31 | 7.02 | 17.67 | 45.62 |
St2 | 43,369,878 | 6.51 | 97.11 | 37,127,935 (85.61%) | 75.17 | 7.33 | 17.5 | 45.35 |
St3 | 51,028,440 | 7.65 | 97.34 | 42,459,724 (83.21%) | 76.29 | 6.45 | 17.26 | 46.17 |