miRNA name | GPa | XZ29b | Transcript | Annotation | Degradome detectionc |
---|---|---|---|---|---|
ata-miR156a-3p | 0.20 | 0.89 | HORVU3Hr1G072810.1 | Gibberellin 2-oxidase | Y |
ata-miR156a-5p | −0.49 | 0.91 | HORVU3Hr1G094730.2 | Squamosa promoter-binding-like protein 2 | Y |
HORVU6Hr1G019700.2 | Squamosa promoter-binding-like protein 3 | Y | |||
bdi-miR156h-3p | 0.33 | −1.15 | HORVU4Hr1G025850.7 | Structure-specific endonuclease subunit slx1 | N |
HORVU4Hr1G012480.3 | Leucine-rich receptor-like protein kinase family protein | N | |||
hvu-miR159a | −0.21 | −0.67 | HORVU3Hr1G079490.4 | MYB domain protein 33 | Y |
hvu-MIR159a-5p | −0.44 | −1.36 | HORVU1Hr1G088510.1 | Mitogen-activated protein kinase 16 | N |
osa-miR319a-3p.2-3p | −0.35 | 0.76 | HORVU5Hr1G103400.1 | TCP family transcription factor 4 | Y |
HORVU2Hr1G060120.1 | TCP family transcription factor 4 | Y | |||
ata-miR160a-5p | −0.44 | −0.77 | HORVU2Hr1G089670.2 | Auxin response factor 10 | Y |
HORVU7Hr1G101270.6 | Auxin response factor 16 | Y | |||
HORVU6Hr1G026750.1 | Auxin response factor 18 | Y | |||
HORVU1Hr1G041770.6 | Auxin response factor 22 | Y | |||
ata-miR164c-3p | 0.37 | 0.63 | HORVU6Hr1G088160.5 | Quinone oxidoreductase | Y |
hvu-miR166a | −0.82 | −1.61 | HORVU5Hr1G010650.1 | Homeobox-leucine zipper protein family | Y |
HORVU5Hr1G061410.29 | Homeobox-leucine zipper protein HOX10 | Y | |||
HORVU0Hr1G010250.3 | Homeobox-leucine zipper protein HOX32 | Y | |||
HORVU1Hr1G041790.2 | Homeobox-leucine zipper protein family | Y | |||
ata-miR166a-3p | −0.54 | −1.84 | HORVU0Hr1G010250.3 | Homeobox-leucine zipper protein HOX32 | N |
ata-miR166a-5p | −0.71 | −0.03 | HORVU5Hr1G056820.4 | Histidine protein methyltransferase 1 homolog | N |
ata-miR166d-5p | −0.53 | −0.29 | HORVU4Hr1G018020.2 | F-box/WD-40 repeat-containing protein | N |
ata-miR167a-5p | −0.63 | −0.17 | HORVU2Hr1G121110.32 | Auxin response factor 6 | Y |
ata-miR167b-3p | −0.92 | −0.71 | HORVU1Hr1G075520.2 | Jacalin-related lectin 3 | N |
ata-miR167b-5p | 0.58 | −0.23 | HORVU2Hr1G059280.1 | SWI/SNF complex subunit SWI3C | N |
tae-miR167c-5p | 0.64 | −2.00 | HORVU1Hr1G077630.2 | Ubiquitin carboxyl-terminal hydrolase 25 | N |
HORVU2Hr1G059280.1 | SWI/SNF complex subunit SWI3C | N | |||
ata-miR167f-3p | 0.29 | 0.84 | HORVU4Hr1G016990.3 | Cysteine desulfurase | N |
hvu-miR168-3p | −0.71 | 1.04 | HORVU5Hr1G037570.4 | Receptor-like protein kinase | N |
hvu-miR168-5p | −0.55 | −0.83 | HORVU1Hr1G055570.4 | WD repeat-containing protein WRAP73 | Y |
ata-miR169i-5p | 0.42 | −1.58 | HORVU5Hr1G092700.17 | Nuclear transcription factor Y subunit A-10 | Y |
HORVU4Hr1G075830.4 | Nuclear transcription factor Y subunit A-3 | Y | |||
HORVU6Hr1G081080.12 | Nuclear transcription factor Y subunit A-5 | Y | |||
ata-miR169d-5p | −0.46 | −0.86 | HORVU5Hr1G092700.17 | Nuclear transcription factor Y subunit A-10 | Y |
HORVU4Hr1G075830.4 | Nuclear transcription factor Y subunit A-3 | Y | |||
HORVU6Hr1G081080.12 | Nuclear transcription factor Y subunit A-5 | Y | |||
ata-MIR169d-3p | −0.91 | −1.82 | HORVU5Hr1G089950.4 | Chromodomain-helicase-DNA-binding protein Mi-2 homolog | N |
ata-miR169h-3p | −0.81 | 0.18 | HORVU1Hr1G075540.3 | Mitochondrial processing peptidase alpha subunit | Y |
ata-miR171b-5p | −0.70 | 0.14 | HORVU5Hr1G081160.4 | U-box domain-containing protein 73 | N |
ata-miR171a-5p | −1.42 | −1.15 | HORVU2Hr1G076620.7 | T-complex protein 11 | Y |
ata-miR172b-3p | −0.63 | −0.55 | HORVU5Hr1G112440.1 | Ethylene-responsive transcription factor 10 | Y |
HORVU1Hr1G011800.24 | AP2-like ethylene-responsive transcription factor | Y | |||
ata-miR390-5p | −1.86 | −0.56 | HORVU7Hr1G007520.1 | Leucine-rich repeat receptor-like protein kinase family protein | N |
ata-miR393-5p | −0.16 | −1.57 | HORVU2Hr1G070800.3 | HvAFB | Y |
HORVU1Hr1G021550.4 | HvTIR1 | Y | |||
ata-miR394-5p | −1.18 | −0.30 | HORVU1Hr1G043940.3 | Protein TIC110, chloroplastic | N |
HORVU6Hr1G018370.1 | Calnexin 1 | N | |||
ata-miR396a-5p | 0.16 | −1.20 | HORVU7Hr1G008680.14 | Growth-regulating factor 5 | Y |
HORVU4Hr1G010080.6 | Growth-regulating factor 6 | Y | |||
HORVU4Hr1G003440.12 | Growth-regulating factor 9 | Y | |||
ata-miR396e-5p | 0.51 | −1.46 | HORVU7Hr1G008680.14 | Growth-regulating factor 5 | Y |
HORVU4Hr1G010080.6 | Growth-regulating factor 6 | Y | |||
HORVU4Hr1G003440.12 | Growth-regulating factor 9 | Y | |||
osa-miR444a-3p.2 | −0.14 | −0.82 | HORVU2Hr1G080490.1 | MADS-box transcription factor 27 | Y |
ppt-miR477h | 1.34 | 2.83 | HORVU1Hr1G050450.2 | Replication factor C subunit 5 | N |
osa-miR827 | −0.46 | −1.26 | HORVU6Hr1G065710.13 | SPX domain-containing membrane protein | N |
ata-miR1432-5p | −1.56 | 0.21 | HORVU1Hr1G094160.1 | Calmodulin like 43 | Y |
HORVU5Hr1G111520.1 | EF hand calcium-binding protein family | Y | |||
hvu-miR5048a | 0.36 | −1.68 | HORVU7Hr1G065130.1 | Receptor kinase 2 | Y |
HORVU7Hr1G043150.1 | Protein kinase superfamily protein | Y | |||
tae-miR7757-5p | 0.66 | −0.55 | HORVU5Hr1G086040.7 | NBS-LRR disease resistance protein, putative | Y |
tae-MIR9662a-5p | −0.38 | 2.33 | HORVU5Hr1G123930.2 | Beta-fructofuranosidase, insoluble isoenzyme 3 | N |
ata-MIR9863a-5p | 0.58 | 1.39 | HORVU5Hr1G007750.22 | FAR1-related sequence 3 | N |
HORVU1Hr1G004650.4 | Purple acid phosphatase 22 | N | |||
ppt-miR894 | −0.02 | 2.08 | HORVU7Hr1G041460.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | Y |
hvu-miR5051 | 0.04 | −0.92 | HORVU7Hr1G054660.6 | Chromosome 3B, genomic scaffold, cultivar Chinese Spring | N |
HORVU4Hr1G083260.5 | DnaJ homolog subfamily B member 4 | N | |||
bdi-miR5054 | −1.98 | 2.07 | HORVU4Hr1G003990.3 | RNA-binding protein 1 | Y |
HORVU6Hr1G088580.4 | Zinc finger (C3HC4-type RING finger) family protein | Y | |||
osa-miR5072 | −1.21 | 1.43 | HORVU3Hr1G075970.2 | Pectate lyase family protein | N |
gma-miR6300 | 0.86 | 3.08 | HORVU4Hr1G052010.2 | WRKY DNA-binding protein 46 | Y |
HORVU0Hr1G035440.1 | Non-specific phospholipase C4 | Y | |||
ptc-miR6478 | 1.04 | 3.46 | HORVU7Hr1G076700.1 | Myosin-J heavy chain | N |
ath-miR8175 | −2.46 | 1.96 | HORVU5Hr1G085710.3 | Aquaporin-like superfamily protein, HvNIP1;2 | N |
PC-miR1 | 0.00 | −0.73 | HORVU4Hr1G042240.2 | Hexosyltransferase | N |
PC-miR2 | 0.00 | 1.26 | HORVU1Hr1G074900.1 | BZIP transcription factor | N |
PC-miR4 | 2.11 | 0.00 | HORVU6Hr1G035300.19 | U11/U12 small nuclear ribonucleoprotein 25Â kDa protein | N |
PC-miR6 | −0.69 | 0.70 | HORVU6Hr1G076340.1 | Glycosyltransferase family 61 protein | N |