Skip to main content

Table 2 GO enrichment analysis of expression-level dominance genes in the resynthesized B. napus

From: Homoeolog expression bias and expression level dominance in resynthesized allopolyploid Brassica napus

Expression patterns GO IDa GO Name FDR
ELD-A GO:0006612 protein targeting to membrane 5.49E-20
GO:0010363 regulation of plant-type hypersensitive response 5.77E-19
GO:0043069 negative regulation of programmed cell death 1.79E-18
GO:0010200 response to chitin 2.91E-17
GO:0046686 response to cadmium ion 8.27E-17
ELD-C GO:0046686 response to cadmium ion 1.86E-21
GO:0006626 protein targeting to mitochondrion 3.72E-21
GO:0006094 gluconeogenesis 1.44E-13
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 9.97E-13
GO:0009853 photorespiration 7.10E-10
Transgressive up-regulation GO:0046686 response to cadmium ion 2.49E-24
GO:0006096 glycolytic process 8.55E-18
GO:0006094 gluconeogenesis 8.99E-18
GO:0009409 response to cold 3.72E-17
GO:0009744 response to sucrose 7.62E-15
Transgressive down-regulation
Additivity GO:0006499 N-terminal protein myristoylation 2.02E-09
GO:0015996 chlorophyll catabolic process 5.78E-07
GO:0080086 stamen filament development 1.66E-06
GO:0009651 response to salt stress 1.75E-05
GO:0042398 cellular modified amino acid biosynthetic process 2.33E-05
  1. aThe top 5 significantly enriched biological process terms for each type of expression patterns and all significantly enriched GO terms are listed in Additional file 2