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Table 1 Brief statistics of the transcriptome assemblies

From: RNA-seq highlights parallel and contrasting patterns in the evolution of the nuclear genome of fully mycoheterotrophic plants

  Epipogium aphyllum Epipogium roseum Hypopitys monotropa
All transcripts CDSsa All transcripts CDSsa All transcripts CDSsa
Number of sequences 992,338 20,958 1,336,170 19,026 217,166 13,276
Number of sequences longer or equal to 1000 bps 39,403 4321 28,284 3259 33,560 5421
Total length of sequences 290,947,719 12,988,731 321,048,790 10,721,418 116,614,033 13,496,709
N50 371 1173 257 990 1199 1470
Median length of sequences 178 306 164 315 237 807
  1. aHere, the CDS is defined as the longest ORF in the major isoforms of the transcripts that were assigned at least one GO term (low-coverage transcripts and contaminating transcripts are not considered)