Unlocking the novel genetic diversity and population structure of synthetic Hexaploid wheat

BMC Genomics

Table 5 Population genetic diversity summary statistics of 101 synthetic hexaploid wheats (SHWs) and 12 bread wheat cultivars obtained from GenoDive

Genome	Population	No. of. Genotypes	SNPs used	Eff_num^a	H_o^b	H_s^c	Gene diversity of SHW increased compared to BW (%)
A			11,297
	Synthetic Hexaploid wheat	101		1.54	0.19	0.33	37.5
	Bread Wheat	12		1.38	0.17	0.24
B			11,297
	Synthetic Hexaploid wheat	101		1.54	0.19	0.33	32.0
	Bread Wheat	12		1.38	0.18	0.25
D			10,008
	Synthetic Hexaploid wheat	101		1.51	0.20	0.32	88.2
	Bread Wheat	12		1.26	0.17	0.17
AB			23,930
	Synthetic Hexaploid wheat	101		1.55	0.19	0.33	32.0
	Bread Wheat	12		1.38	0.17	0.25
ABD			33,938
	Synthetic Hexaploid wheat	101		1.54	0.19	0.33	50.0
	Bread Wheat	12		1.35	0.17	0.22
ABD + unmapped			34,887
	Synthetic Hexaploid wheat	101		1.54	0.19	0.33	50.0
	Bread Wheat	12		1.35	0.17	0.22

^aEff-num: effective number of alleles, ^bH_O: observed heterozygosity, and ^cH_S: gene diversity

ISSN: 1471-2164