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Table 1 Comparison of sequenced Naegleria genomes

From: The genome of Naegleria lovaniensis, the basis for a comparative approach to unravel pathogenicity factors of the human pathogenic amoeba N. fowleri

 

N. lovaniensis

N. fowleri

N. gruberi

Genome Size (Mb)

30.8

29.6

40.9

GC content (%)

37

37

35

Repeat content (%)

3.5

2.5

5.1

Number of contigs (Scaffolds)

111

1729 (574)

1977 (784)

N50 of contigs (bp)

657,933

38,128

159,679

Number of predicted genes

15,195

17,252 (based on RNAseq data)

15,711

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BMC Genomics

ISSN: 1471-2164

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