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Table 1 Differentially expressed genes affected by colostrum treatment and dam parity

From: Genome wide transcriptome analysis provides bases on colonic mucosal immune system development affected by colostrum feeding strategies in neonatal calves

  DE gene Log (FC) FDR
Within parity
 TRT6_H vs. TRT0_H RGS2 3.01 0.032
 TRT12_H vs. TRT0_H NS NS NS
 TRT12_H vs. TRT6_H NS NS NS
 TRT6_C vs. TRT0_C NS NS NS
 TRT12_C vs. TRT0_C RGS2 −2.75 0.002
 TRT12_C vs. TRT6_C NS NS NS
Within treatment
 TRT0_C vs. TRT0_H RGS2 3.04 0.006
 TRT6_C vs. TRT6_H CCL14 2.09 0.029
 TRT12_C vs. TRT12_H NS NS NS
Across parity
 TRT6 vs. TRT0 NS NS NS
 TRT12 vs. TRT0 NS NS NS
 TRT12 vs. TRT6 NS NS NS
Across treatment
 C vs. H NS NS NS
  1. Note: H = primiparous heifers; C = multiparous cows; RGS2 = regulator of G-protein signaling 2; NS = not significant; CCL14 = chemokine (C-C motif) ligand 14; FC = fold change; cutoff for DE genes was FDR < 0.10, and |FC| > 1.2
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BMC Genomics

ISSN: 1471-2164

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