Assembler | # of candidates found | # of transcripts matched for Target coverage of | ||
---|---|---|---|---|
≥ 95% | ≥ 90% | ≥ 80% | ||
SOAPdenovo-trans | 48,462 | 2613 | 3522 | 5349 |
Trans-ABySS | 87,686 | 3626 | 4781 | 6967 |
Trinity | 82,865 | 4008 | 5279 | 7680 |
BinPacker | 20,612 | 3486 | 4314 | 5685 |
Multi-k OASES | 202,152 | 5120 | 6737 | 9520 |
Bridger | 58,217 | 4013 | 5093 | 7017 |
TraRECo, Dth = 0.06, CDth = 0 | 219,402 | 5366 | 7010 | 10,168 |
TraRECo, Dth = 0.06, CDth = 1 | 118,342 | 4845 | 6308 | 9078 |
TraRECo, Dth = 0.06, CDth = 2 | 109,551 | 4774 | 6209 | 8901 |
TraRECo, Dth = 0.06, CDth = 4 | 79,073 | 4537 | 5890 | 8393 |
TraRECo, Dth = 0.06, CDth = 6 | 58,396 | 4217 | 5436 | 7642 |
TraRECo, Dth = 0.06, CDth = 8 | 47,095 | 3937 | 5026 | 6973 |
TraRECo, Dth = 0.06, CDth = 12 | 35,506 | 3396 | 4305 | 5880 |
TraRECo, Dth = 0.06, CDth = 16 | 28,997 | 2959 | 3749 | 5089 |