Table 3 The potential mobile units (PMUs) genes identifed in JWB phytoplasma genome
ORF | PMU1 | PMU4 | PMU2 | PMU3 | Product |
|---|---|---|---|---|---|
2 | tra5 | putative transposase | |||
3 | SIG3.4 | SIG3.4 | SIG3.4 | SIG3.4 | DNA-directed RNA polymerase sigma-70 factor |
4 | dam | DNA methyltransferase | |||
5 | ssb | ssb | ssb | ssb | single-stranded DNA-binding protein |
6 | hupB | hupB | hupB | hupB | DNA-binding protein HU |
7 | NA | NA | NA | NA | hypothetical protein |
8 | NA | AAA+ ATPase | |||
9 | NA | group II intron reverse transcriptase | |||
10 | ftsH | hflB | ftsH | ftsH | ATP-dependent Zn protease |
11 | smc | smc | smc | smc | Chromosome segregation ATPase |
12 | NA | NA | NA | NA | hypothetical protein |
13 | NA | NA | NA, SAP06-like effector | NA SAP68-like effector | hypothetical protein |
14 | NA | NA effector protein | NA effector protein | hypothetical protein | |
15 | NA SAP54-like effector | NA | hypothetical protein | ||
16 | NA | NA Phage-related protein | NA Phage-related protein | hypothetical protein | |
17 | NA | NA | NA | hypothetical protein | |
18 | NA | hypothetical protein | |||
19 | NA | NA | phage-associated protein | ||
20 | NA | NA | hypothetical protein | ||
21 | NA | NA | NA | NA | Phage-related protein |
22 | tmk | tmk, | tmk | tmk | thymidylate kinase |
23 | NA | NA | NA | NA | hypothetical protein |
24 | NA | NA | NA | NA | hypothetical protein |
25 | dnaB | dnaB | dnaB | dnaB | DNA helicase |
26 | dnaG | dnaG | dnaG | dnaG | DNA primase |
27 | NA outer membrane receptor proteins | NA outer membrane receptor proteins | NA | NA | hypothetical protein |
28 | tra5 | tra5 | putative transposase | ||
29 | NA | NA | hypothetical protein | ||
30 | hypothetical protein | ||||
31 | DNA helicase | ||||
32 | NA | NA | hypothetical protein | ||
33 | tra5 | tra5 | putative transposase | ||
34 | tra5 | tra5 | putative transposase |