Parameter | Number |
---|---|
Total aligned reads | 1,641,919,128 |
Total number of high quality assembled paired-end reads | 654,673,506 |
Total trinity transcripts | 577,037 |
Total trinity ‘genes’ | 433,809 |
Average ‘genes’ length (pb) | 569 |
%GC | 43,59 |
Longest contig (bp) | 20,709 |
Shortest contig | 224 |
Number of contigs > 200 bp | 390,662 |
Number of contigs > 1 Kb | 40,133 |
Number of contigs > 5 Kb | 2797 |
Number of contigs > 10 Kb | 217 |
Number of predict ORFs (transdecoder) | 83,764 |