Table 1 Enrichment analysis showing 20 most overrepresented1 Biological Process for differentially expressed genes2 for the effects of diet and sex in the muscle tissue
Biological Process | # genes | FE | P-value |
|---|---|---|---|
Diet | |||
 Positive regulation of actin cytoskeleton reorganization (GO:2000251) | 2 | 21.68 | 4.88E-03 |
 Peptidyl-proline hydroxylation (GO:0019511) | 2 | 21.68 | 4.88E-03 |
 Positive regulation of blood vessel endothelial cell migration (GO:0043536) | 3 | 13.21 | 1.90E-03 |
 Negative regulation of myeloid cell differentiation (GO:0045638) | 4 | 9.56 | 1.02E-03 |
 Membrane depolarization (GO:0051899) | 3 | 9.4 | 4.70E-03 |
 Regulation of protein targeting (GO:1903533) | 4 | 6.33 | 4.26E-03 |
 Negative regulation of hemopoiesis (GO:1903707) | 4 | 5.75 | 5.90E-03 |
 Regulation of cell morphogenesis involved in differentiation (GO:0010769) | 6 | 4.55 | 2.44E-03 |
 Regulation of mitochondrion organization (GO:0010821) | 5 | 4.49 | 5.87E-03 |
 Regulation of neuron projection development (GO:0010975) | 8 | 4.27 | 7.09E-04 |
 Regulation of intracellular transport (GO:0032386) | 7 | 3.55 | 4.16E-03 |
 Regulation of cell morphogenesis (GO:0022604) | 8 | 3.33 | 3.28E-03 |
 Regulation of neuron differentiation (GO:0045664) | 9 | 3.32 | 1.86E-03 |
 Positive regulation of transport (GO:0051050) | 14 | 2.92 | 3.81E-04 |
 Regulation of plasma membrane bounded cell projection organization (GO:0120035) | 8 | 2.86 | 7.79E-03 |
 Regulation of neurogenesis (GO:0050767) | 9 | 2.68 | 7.28E-03 |
 Regulation of nervous system development (GO:0051960) | 10 | 2.55 | 6.61E-03 |
 Regulation of transport (GO:0051049) | 20 | 2.08 | 2.13E-03 |
 Cell surface receptor signaling pathway (GO:0007166) | 20 | 1.87 | 6.52E-03 |
 Regulation of localization (GO:0032879) | 25 | 1.74 | 7.58E-03 |
Sex | Â | Â | Â |
 Histone H3-K27 demethylation (GO:0071557) | 2 | 55.66 | 1.04E-03 |
 Kinetochore assembly (GO:0051382) | 3 | 52.18 | 5.64E-05 |
 Positive regulation of sodium ion transmembrane transporter activity (GO:2000651) | 2 | 39.76 | 1.76E-03 |
 Kinetochore organization (GO:0051383) | 3 | 34.79 | 1.52E-04 |
 Positive regulation of glycoprotein biosynthetic process (GO:0010560) | 3 | 34.79 | 1.52E-04 |
 Regulation of skeletal muscle contraction (GO:0014819) | 2 | 34.79 | 2.19E-03 |
 Positive regulation of glycoprotein metabolic process (GO:1903020) | 3 | 29.82 | 2.25E-04 |
 Centromere complex assembly (GO:0034508) | 3 | 21.97 | 4.97E-04 |
 Establishment of melanosome localization (GO:0032401) | 3 | 20.87 | 5.68E-04 |
 Establishment of pigment granule localization (GO:0051905) | 3 | 19.88 | 6.46E-04 |
 Melanosome localization (GO:0032400) | 3 | 19.88 | 6.46E-04 |
 Pigment granule localization (GO:0051875) | 3 | 18.98 | 7.30E-04 |
 ATP hydrolysis coupled transmembrane transport (GO:0090662) | 3 | 16.06 | 1.14E-03 |
 ATP hydrolysis coupled proton transport (GO:0015991) | 3 | 16.06 | 1.14E-03 |
 Energy coupled proton transmembrane transport, against electrochemical gradient (GO:0015988) | 3 | 14.91 | 1.38E-03 |
 Regulation of glucose metabolic process (GO:0010906) | 5 | 9.53 | 2.41E-04 |
 Regulation of cellular carbohydrate metabolic process (GO:0010675) | 5 | 7.65 | 6.29E-04 |
 Regulation of carbohydrate metabolic process (GO:0006109) | 5 | 6.5 | 1.26E-03 |
 Chromosome organization (GO:0051276) | 17 | 2.59 | 3.56E-04 |
 Cellular macromolecular complex assembly (GO:0034622) | 14 | 2.57 | 1.32E-03 |