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Table 2 Summary of identified virus-associated contigs

From: RNA viromes of the oriental hybrid lily cultivar “Sorbonne”

Study Project No. SRA No. Virus No. of contigs Minimum contig length (bp) Maximum contig length (bp)
Study A PRJNA192656 SRR787322 PlAMV 4 6140 6149
Study A PRJNA192656 SRR787322 LMoV 2 9656 9661
Study A PRJNA192656 SRR787322 LSV 4 3611 4775
Study A PRJNA192656 SRR787322 CMV RNA3 3 289 2196
Study A PRJNA192656 SRR787322 CMV RNA1 12 262 731
Study A PRJNA192656 SRR787322 CMV RNA2 6 315 1013
Study B PRJNA435633 SRR6837843 PlAMV 2 1562 4501
Study B PRJNA435633 SRR6837844 PlAMV 2 788 5112
Study B PRJNA435633 SRR6837845 PlAMV 23 204 5227
Study B PRJNA435633 SRR6837846 PlAMV 4 382 1412
Study B PRJNA435633 SRR6837847 PlAMV 6 232 3790
Study B PRJNA435633 SRR6837848 PlAMV 11 275 4485
Study B PRJNA435633 SRR6837850 PlAMV 20 201 5434
Study B PRJNA435633 SRR6837851 PlAMV 18 277 2715
Study B PRJNA435633 SRR6837851 TRV RNA2 5 1224 3669
Study B PRJNA435633 SRR6837851 TRV RNA1 18 218 6773
Study B PRJNA435633 SRR6837852 PlAMV 15 214 4188
Study B PRJNA435633 SRR6837853 PlAMV 6 232 3861
Study B PRJNA435633 SRR6837854 PlAMV 7 237 3729
Study B PRJNA435633 SRR6837855 PlAMV 5 818 6145
Study B PRJNA435633 SRR6837856 PlAMV 6 779 4446
Study C PRJNA341300 SRR4125791 CMV RNA3 2 917 1237
Study C PRJNA341300 SRR4125791 CMV RNA1 2 411 2774
Study C PRJNA341300 SRR4125791 CMV RNA2 1   2688
Study C PRJNA341300 SRR4125791 TVX 6 312 2162
Study C PRJNA341300 SRR4125791 LSV 6 201 855
Study C PRJNA341300 SRR4125791 LMoV 2 392 8952
Study C PRJNA341300 SRR4128962 TVX 22 205 1442
Study C PRJNA341300 SRR4128962 LMoV 12 332 5408
Study C PRJNA341300 SRR4128962 CMV RNA3 3 201 1762
Study C PRJNA341300 SRR4128962 CMV RNA1 2 378 2768
Study C PRJNA341300 SRR4128962 CMV RNA2 1   2791
Study C PRJNA341300 SRR4128962 LSV 9 231 2183
Study C PRJNA341300 SRR4128962 PlAMV 0   
Study C PRJNA341300 SRR4128968 LMoV 7 282 5360
Study C PRJNA341300 SRR4128968 CMV RNA3 4 514 985
Study C PRJNA341300 SRR4128968 CMV RNA1 3 297 2751
Study C PRJNA341300 SRR4128968 CMV RNA2 1   2686
Study C PRJNA341300 SRR4131341 LSV 8 205 3626
Study C PRJNA341300 SRR4131341 LMoV 2 4302 5349
Study C PRJNA341300 SRR4131341 TVX 9 276 1914
Study C PRJNA341300 SRR4131341 CMV RNA3 5 246 873
Study C PRJNA341300 SRR4131341 CMV RNA1 3 376 1708
Study C PRJNA341300 SRR4131341 CMV RNA2 2 913 2004
Study C PRJNA341300 SRR4131406 LSV 10 202 2593
Study C PRJNA341300 SRR4131406 LMoV 4 1993 7253
Study C PRJNA341300 SRR4131406 TVX 10 239 962
Study C PRJNA341300 SRR4131406 CMV RNA3 5 201 352
Study C PRJNA341300 SRR4142853 LMoV 3 207 8811
Study C PRJNA341300 SRR4142853 TVX 5 350 2141
Study C PRJNA341300 SRR4142853 CMV RNA3 2 898 1251
Study C PRJNA341300 SRR4142853 LSV 15 210 1019
Study C PRJNA341300 SRR4142853 CMV RNA2 3 829 1054
Study C PRJNA341300 SRR4142853 CMV RNA1 6 205 795
Study C PRJNA341300 SRR4143329 LSV 9 211 2604
Study C PRJNA341300 SRR4143329 TVX 9 312 2018
Study C PRJNA341300 SRR4143329 LMoV 1   9631
Study C PRJNA341300 SRR4143329 CMV RNA3 3 432 924
Study C PRJNA341300 SRR4143329 CMV RNA1 1   217
Study C PRJNA341300 SRR4143329 CMV RNA2 0   
Study C PRJNA341300 SRR4143339 LMoV 3 271 9003
Study C PRJNA341300 SRR4143339 LSV 6 201 2547
Study C PRJNA341300 SRR4143339 TVX 6 304 2137
Study C PRJNA341300 SRR4143339 CMV RNA3 3 254 1001
Study C PRJNA341300 SRR4143339 CMV RNA2 1   332
Study C PRJNA341300 SRR4143339 CMV RNA1 0   
  1. Name of identified virus, number of virus-associated contigs, and lengths of minimum and maximum contigs, respectively, are indicated