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Table 2 Read mapping statistics

From: Correcting palindromes in long reads after whole-genome amplification

  Reads mapped (%) Avg. coverage Avg. read length
Alignment filter 80% 95% 80% 95% 80% 95%
Ath-WGA 99 44 34 40.5 17.4 13.4 8987 5568 5397
Ath-Clean 99 81 66 55.1 48.1 41.2 4690 4532 4697
Ath-Ctrl 95 72 57 34.2 29.2 24.8 5799 5583 5852
  1. Statistics of read mappings with BLASR to the TAIR10 reference genome, calculated without filtering for a minimum read alignment length (‘-’) and after filtering for reads aligned with at least 80% or 95% nucleotide identity