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Table 5 Read mapping statistics on the human and different GorY assemblies

From: Correcting palindromes in long reads after whole-genome amplification

  HiSeq GorY-WGA GorY-Clean
Assembly Length (Mbp) Genome coverage Read cov. Genome coverage Read cov. Genome coverage Read cov.
   (Mbp) (%)   (Mbp) (%)   (Mbp) (%)  
HumY 26.8 22.3 83 1897 18.2 68 58.87 18.5 69 74.84
GorY 23.0 18.3 80 1169 21.1 92 71.33 21.1 92 99.15
GorY-WGA 26.5 24.9 94 1353 26.5 100 73.15 26.5 100 97.08
GorY-Clean 24.3 22.4 92 1586 24.3 100 83.21 24.3 100 109.67
  1. Mapping of HiSeq, PacBio WGA and PacBio cleaned reads on the human Y chromosome (HumY), the gorilla Y chromosome (GorY) and the newly created gorilla Y assemblies (GorY-WGA, GorY-Clean). The read coverage is the average number of reads that a nucleotide has aligned to it