Table 2 Ten most abundant known carp miRNAs identified in black, white, and red Koi carp skin samples
miRNA | Sequence | BS Count | RS Count | WS Count |
|---|---|---|---|---|
ccr-miR-199-5p | CCCAGTGTTCAGACTACCTGTTC | 4,100,063 | 3,122,326 | 3,587,226 |
ccr-miR-199-3p | ACAGTAGTCTGCACATTGGTT | 1,730,490 | 1,389,612 | 1,653,539 |
ccr-let-7a | TGAGGTAGTAGGTTGTATAGTT | 1,297,246 | 1,133,283 | 1,272,622 |
ccr-miR-21 | TAGCTTATCAGACTGGTGTTGGC | 1,309,364 | 1,138,255 | 1,255,244 |
ccr-miR-26a | TTCAAGTAATCCAGGATAGGCT | 1,086,517 | 902,538 | 1,092,863 |
ccr-miR-99 | AACCCGTAGATCCGATCTTGT | 809,551 | 750,404 | 781,225 |
ccr-miR-100 | AACCCGTAGATCCGAACTTGT | 877,228 | 697,664 | 706,497 |
ccr-miR-125b | TCCCTGAGACCCTAACTTGTGA | 742,182 | 506,300 | 590,501 |
ccr-miR-22a | AAGCTGCCAGCTGAAGAACTGT | 529,973 | 402,752 | 535,663 |
ccr-miR-126-3p | CTCGTACCGTGAGTAATAATGC | 485,109 | 394,630 | 476,118 |