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Table 3 Bins reported by the binning tools on the simulated multi-species metagenome. It also shows the number of reads that belong to each genome for each bin, and the time it took each tool to create the bins

From: CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes

Tool Bins Total reads by bin Synechocystis Dokdonella Hymnobacter Microbacteriaceae Rhizobium Time (m)
CLAME 7 21,182 21,182 0 0 0 0 3
18,054 18,054 0 0 0 0
209,642 0 209,642 0 0 0
12,152 0 12,152 0 0 0
13,927 0 13,927 0 0 0
10,405 0 10,405 0 0 0
24,315 0 0 0 24,315 0
BiMeta 1 601,624 112,805 376,022 37,599 37,599 37,599 32
MetaProb 5 361,966 1 341,866 108 7236 12,755 11
27,977 508 12,139 1707 214 13,409
113,349 111,889 695 641 6 118
38,400 294 729 34,383 2446 548
59,932 113 20,593 760 27,697 10,769
MetaBinG 5 410,033 30,727 302,805 23,480 19,944 33,081 120
73,263 799 57,637 3915 9490 1423
61,401 56,764 2344 772 1211 310
24,966 18,955 3042 1079 870 1021
10,826 12 3800 6444 436 134