Table 7 Assembler statistic reported by each tool on the hot spring dataset of the biggest bin produced by CLAME
Total large contigs (> 500 bp) | Reads assembled | Largest contig (bp) | Expected genome size (Mbp) | N50 | AVG contig length (bp) | Peak depth | GC (%) | |
|---|---|---|---|---|---|---|---|---|
Newbler | 178 | 380,796 (99%) | 99,748 | 3.0 | 31,130 | 17,067 | 60 | 71 |
Ray | 255 | 372,145 (97%) | 72,110 | 3.0 | 19,598 | 20,242 | 23 | 71 |
MetaVelvet | 712 | 371,284 (97%) | 26,703 | 2.9 | 6816 | 4135 | 40 | 71 |