Table 2 Clusters of Repeats with a high frequency of configuration with their specific pathway
Subcluster | Repeats | General Pathway | Specific Pathways |
|---|---|---|---|
S1 | LINE/L2, Alu, LINE/L1, hAT-Charlie | Genetic Information Processing (GIP) | GIP_Replication and repair |
GIP_Transcription | |||
GIP_Translation | |||
S3 | MIR, Simple_repeat | Environmental Information Processing (EIP) Organismal Systems (OS) Cellular Processes (CP) | EIP_Signal transduction |
OS_Aging | |||
OS_Environmental adaptation | |||
OS_Excretory system | |||
CP_Cellular community | |||
S10 | ERVL-MaLR, ERV1 | Metabolism (M) | M_Carbohydrate metabolism |
M_Energy metabolism | |||
M_Lipid metabolism | |||
M_Xenobiotics biodegradation and metabolism |