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Table 2 Statistics of de novo assembly of root transcriptome of guar

From: Identification and characterization of SSR, SNP and InDel molecular markers from RNA-Seq data of guar (Cyamopsis tetragonoloba, L. Taub.) roots

Characteristic

Details

Total number of transcripts

1,02479

Min length

201

Max length

16,844

Average length

1016.62

Standard deviation

1150.28

Median length

500

Number of contigs < 500 bp

51,229

Number of contigs ≥500 bp

51,250

Number of contigs ≥1000 bp

32,949

Number of contigs ≥2000 bp

15,360

Number of contigs ≥5000 bp

1297

N50

1907

Contigs in N50

16,574

GC content

39.82%

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BMC Genomics

ISSN: 1471-2164

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