Table 7 Characteristics of SNPs located in guar unigenes involved in biotic and abiotic stress responses
S. No. | SNP name | Gene name | SNP allele | SNP position | Gene description | Gene function |
|---|---|---|---|---|---|---|
1 | OT769 | MTR_2g078070 | A/G | 3008 | NBS-LRR type | Defense response |
2 | OT1113 | KK1_009739 | G/T | 272 | Disease resistance protein RGA2 | Late blight (Phytophthora infestans) resistance |
3 | OT1114 | -do- | A/G | 428 | -do- | -do- |
4 | OT1115 | -do- | A/G | 485 | -do- | -do- |
5 | OT1116 | -do- | A/C | 1845 | -do- | -do- |
6 | OT1161 | MTR_3g035960 | A/T | 978 | NBS-LRR type disease resistance protein | R (Resistance) genes, plant defense |
7 | OT1162 | -do- | T/C | 1196 | -do- | -do- |
8 | OT1163 | -do- | A/G | 2357 | -do- | -do- |
9 | OT1431 | KK1_033834 | C/T | 493 | Disease resistance RPP13-like protein 1 | Plant hypersensitive response, disease resistance |
10 | OT1432 | -do- | A/G | 528 | -do- | -do- |
11 | OT1433 | -do- | T/G | 548 | -do- | -do- |
12 | OT1434 | -do- | C/A | 549 | -do- | -do- |
13 | OT1435 | -do- | T/G | 550 | -do- | -do- |
14 | OT1436 | -do- | T/A | 593 | -do- | -do- |
15 | OT1437 | -do- | G/A | 1323 | -do- | -do- |
16 | OT1881 | MTR_3g466750 | C/G | 1389 | NB-ARC domain disease resistance protein | Defense response |
17 | OT1916 | MTR_3g020890 | A/G | 290 | NB-LRR type disease resistance protein Rps1-k-2 | Phytophthora resistance |
18 | OT2923 | KK1_021617 | Â | 588 | S-norcoclaurine synthase | Pathogen related (PR) 10 protein, defense response |
19 | OT2924 | -do- | C/G | 648 | -do- | -do- |
20 | OT3720 | MTR_2g020040 | G/A | 876 | RING finger and CHY zinc finger domain-containing protein | Negative regulation of p53 |
21 | OT67 | KK1_005680 | C/T | 228 | KK1_005680 | Response to freezing |
22 | OT458 | TCM_044345 | G/A | 2522 | dnaJ protein homolog | Response to heat stress |
23 | OT543 | KK1_034657 | T/A | 718 | Heat shock factor protein HSF24 | Response to heat stress |
24 | OT3934 | LOC100818430 GLYMA_13G105700 | A/T | 218 | heat stress transcription factor A-2-like | Response to heat stress |
25 | OT3935 | -do- | G/T | 590 | -do- | -do- |
26 | OT1691 | KK1_001069 | A/T | 79 | Heat stress transcription factor A-5 | Response to heat stress |
27 | OT1738 | LOC100820566 GLYMA_13G225700 | C/T | 146 | Heat stress transcription factor A-4a-like | Response to heat stress |