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Table 2 Raw and Quality filtered data statistics for Meloidogyne incognita transcriptomes used in this study. (NE: Non-encumbered nematode J2 s; PE: Pasteuria endospore encumbered nematode J2 s; HQ: high quality)

From: A transcriptomic snapshot of early molecular communication between Pasteuria penetrans and Meloidogyne incognita

S. No. Sample name Total no. of reads Total no. of bases Total No. of HQ bases % HQ Bases Total HQ reads Total no of bases in HQ reads Total no. of HQ bases in HQ reads % of HQ bases in HQ reads
  RAW FILTERED
1 NE-1 32,965,096     32,693,312    
  NE-1.1 16,482,548 1,664,737,348 1,650,917,070 99.17 16,346,656 1,651,012,256 1,639,288,636 99.29
  NE-1.2 16,482,548 1,664,737,348 1,643,633,199 98.73 16,346,656 1,651,012,256 1,635,371,533 99.05
2 NE-2 34,946,244     34,621,924    
  NE-2.1 17,473,122 1,764,785,322 1,752,922,754 99.33 17,310,962 1,748,407,162 1,738,496,781 99.43
  NE-2.2 17,473,122 1,764,785,322 1,741,373,228 98.67 17,310,962 1,748,407,162 1,731,955,805 99.06
3 PE-1 39,837,260     39,382,816    
  PE-1.1 19,918,630 2,011,781,630 1,998,248,213 99.33 19,691,408 1,988,832,208 1,977,968,380 99.45
  PE-1.2 19,918,630 2,011,781,630 1,982,135,511 98.53 19,691,408 1,988,832,208 1,969,001,441 99.00
4 PE-2 37,699,176     37,290,198    
  PE-2.1 18,849,588 1,903,808,388 1,891,336,925 99.34 18,645,099 1,883,154,999 1,872,966,510 99.46
  PE-2.2 18,849,588 1,903,808,388 1,876,575,502 98.57 18,645,099 1,883,154,999 1,864,696,419 99.02