Fig. 3

Genomic annotation of differentially expressed lncRNAs detected. A stacked bar chart showing the percent of differentially expressed lncRNAs (average FPKM > 1 in either CV or GF conditions, and FDR-BH < 0.05 between CV and GF conditions) annotated to each genomic region relative to PCGs, including up to 5 kb upstream of transcription start site (TSS), intronic, exonic, 5′-untranslated region (UTR), 3’-UTR, and up to 1 kb downstream of transcriptional termination site (TTS). LncRNAs that were not identified to these locations were considered intergenic. Chromosome coordinates of these differentially regulated lncRNAs in each organ were analyzed using PAVIS