Table 1 The identified types of CRISPR-Cas system in the 84 Pectobacterium genomes
Species/Subspecies | Strain | Number of each CRISPR-Cas system type | ||
|---|---|---|---|---|
I-F | I-E | I-C | ||
P. carotovorum subsp. brasiliense | PBR1692T = LMG 21371T, BC1, B6, Y3, Y29, Y31, Y60, Y62, Y64, CFIA1009, CFIA1033, PcbHPI01, BD255, ATCC 39048, F157, F152 | 1 | 0 | 0 |
PCC21, SX309, BZA12, Y21, Y49, Y52, Y65, S2 | 1 | 1 | 0 | |
LMG 21372, ICMP 19477, CFIA1001, Y46 | 0 | 0 | 0 | |
P. carotovorum subsp. carotovorum | Y57 | 1 | 0 | 0 |
DSM 30168T = NCPPB 312T = ICMP 5702T, B2, Y16 | 0 | 1 | 0 | |
B5, Y39, WPP14 | 1 | 1 | 0 | |
P. carotovorum subsp. odoriferum | Q40, Q106, Q115, Q142, Q166, T4, T5 | 1 | 0 | 0 |
BCS7, S6, S6–2, | 0 | 1 | 0 | |
Q32, Q47 | 1 | 1 | 0 | |
NCPPB 3839T, NCPPB3841, Q3 | 0 | 0 | 0 | |
P. carotovorum subsp. actinidiae | ICMP 19972, ICMP 19971, KKH3T | 1 | 0 | 0 |
Candidatus P. maceratum | F018, F135, Ecc71 | 1 | 0 | 0 |
3–2 | 0 | 1 | 0 | |
SCC1T, F131, PB69, PB70 | 1 | 1 | 0 | |
P. polaris | NCPPB 3395, SS28 | 0 | 1 | 0 |
NIBIO1392 | 1 | 1 | 0 | |
NIBIO1006 T | 0 | 0 | 0 | |
P. atrosepticum | ICMP 1526T = NCPPB 549T, 36A, 21A, CFBP 6276, NCPPB 3404, PB72, SS26, JG10–08, SCRI1043 | 1 | 0 | 0 |
P. parmentieri | RNS08.42.1AT, SCC3193, WPP163, SS90, CFIA1002, PB20 | 1 | 1 | 0 |
D. dadantii | 3937 | 1 | 0 | 1 |
D. zeae | Ech586 | 1 | 1 | 0 |
D. paradisiaca | Ech703 | 1 | 1 | 0 |