Table 6 siRNA DC-clusters differentially expressed in galls at 14dpi located in the vicinity of Arabidopsis transposable elements
DC-cluster name | Gene name Gene description | TE similarity | TE name | |
|---|---|---|---|---|
chr1:8383930–8,384,530 | At1g23710 | hypothetical protein | 0.7606 | ATHATN9 |
chr1:9412105–9,412,396 chr1:9412541–9,412,703 | At1g27100 | Actin cross-linking protein | 0.8485 | AtSB2 |
chr1:11737691–11,737,819 | At1g32460 | hypothetical protein | 0.9656 | ATREP3 |
chr1:12890229–12,890,337 | At1g35190 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase | 0.7529 | ATLINE1 5 |
0.8714 | ATHATN2 | |||
chr1:24483137–24,483,294 | At1g65820 | microsomal glutathione s-transferase | 0.9008 | ATHPOGON3 |
chr2:743734–743,891 | At2g02680 | Cysteine/Histidine-rich C1 domain family | 0.8144 | TNAT1A |
0.8421 | DT1 | |||
0.7864 | TNAT1A | |||
chr2:7123544–7,123,869 | At2g16430 | purple acid phosphatase 10 | 0.7983 | ATMUNX1 |
chr2:9979300–9,979,500 | At2g23430 | cyclin-dependent kinase inhibitor protein (KRP1) | 0.8657 | ATTIR16T3A |
chr2:10139020–10,139,268 | At2g23810 | Tetraspanin Tet8 | 0.7800 | BRODYAGA1A |
chr2:18703172–18,703,490 | At2g45380 | myeloid leukemia factor | 0.9818 | ATLINEIII |
chr3:9964887–9,966,036 | At3g27020 | metal-nicotianamine transporter YSL6 | 0.7614 | ATREP7 |
chr3:11031230–11,031,528 chr3:11030736–11,031,214 | At3g29034 | transmembrane protein | 0.6516 | ATCOPIN_LTR |
chr4:6144430–6,145,149 | At4g09750 | NAD(P)-binding Rossmann-fold superfamily | 0.6691 | ATLINE2 |
chr4:6312052–6,312,340 | At4g10110 | RNA recognition motif (RRM)-containing protein | 0.7590 | ATMUN1 |
0.7882 | ATLINE1A | |||
0.8201 | ATREP1 | |||
chr5:8671661–8,672,311 | At5g25140 | Cytochrome P450 | 0.8462 | ATREP2 |
chr5:16944206–16,944,689 | At5g42380 | calmodulin like 37 | 0.7117 | TAG1 |
chr5:25936470–25,936,892 | At5g64900 | Putative 92-aa protein that is the precursor of AtPep1 | 0.8824 | ATREP6 |
chr5:25935269–25,935,884 | 0.8854 | ATREP6 | ||