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Table 1 Critical DEGs involved in Cd transport in roots of two peanut cultivars

From: Comparative transcriptome analysis revealed key factors for differential cadmium transport and retention in roots of two contrasting peanut cultivars

Gene ID

Log2 fold-change

Description

Gene name

Functional analysisb

Reference

FCd/FCK

SCd/SCK

FCd/SCd

FCK/SCK

Plasma membrane-localized transporters

 107606033

1.80a

1.13

−0.03

− 0.78

metal transporter Nramp5

Nramp5

Transport Cd into cytoplasm

[19, 33]

 107470537

2.01a

1.15

0.20

− 1.11

metal transporter Nramp5-like

Nramp5

Transport Cd into cytoplasm

[19, 33]

 107460699

1.63a

0.91

− 0.02

− 0.80

metal transporter Nramp5-like

Nramp5

Transport Cd into cytoplasm

[19, 33]

 107618045

0.79

1.25a

− 0.65

− 0.25

metal transporter Nramp6

Nramp6

Transport Cd into cytoplasm

[32]

 107461206

1.17a

0.57

0.03

− 0.61

zinc transporter 4, chloroplastic

ZIP4

Transport Cd into cytoplasm

[20]

 G003600

1.05a

0.60

− 0.13

−0.62

zinc transporter 4, chloroplastic

ZIP4

Transport Cd into cytoplasm

[20]

 107637744

3.10a

0.12

4.03a

0.20

Fe (2+) transport protein 1

IRT1

Transport Cd into cytoplasm

[31, 34]

 107614121

1.09a

1.13

−0.01

0.04

zinc transporter 1

ZIP1

Export Cd out of cell

[46]

 107458727

0.34

0.61

− 1.28a

−1.05

zinc transporter 1

ZIP1

Export Cd out of cell

[46]

 107482454

1.42a

0.89

−0.42

−0.97

zinc transporter 1; zinc transporter 5

ZIP1/ZIP5

Export Cd out of cell

[46]

 107638316

1.37a

0.64

−0.15

− 0.96

zinc transporter 5

ZIP5

Export Cd out of cell

[46]

 107460374

1.33a

0.70

0.76

0.08

metal-nicotianamine transporter YSL3

YSL3

Export Cd out of cell

[43]

 107605860

1.51a

0.81

0.93

0.19

metal-nicotianamine transporter YSL3

YSL3

Export Cd out of cell

[43]

 107460375

1.01a

0.68

0.33

−0.04

metal-nicotianamine transporter YSL3

YSL3

Export Cd out of cell cytoplasm

[43]

 107629798

0.44

N/A

6.18a

6.36a

metal-nicotianamine transporter YSL7 isoform X1

YSL7

Export Cd out of cell

[40]

 G001484

0.36

− 1.57

−0.18

− 2.31a

ABC transporter G family member 36

ABCG36

Export Cd out of cell

[41]

 107617325

0.03

−1.75

0.00

−1.93a

ABC transporter G family member 36-like

ABCG36

Export Cd out of cell

[41]

 G001485

0.04

−1.61

−0.44

− 2.28a

ABC transporter G family member 36-like

ABCG36

Export Cd out of cell

[41]

 107459920

−0.15

− 0.38

2.20a

1.94a

pleiotropic drug resistance protein 1

PDR1

Export Cd out of cell

[41, 42]

 107647851

2.76a

−0.20

0.11

− 3.44a

pleiotropic drug resistance protein 1

PDR1

Export Cd out of cell

[41, 42]

 107491711

3.49a

−0.04

−0.52

−4.52a

pleiotropic drug resistance protein 1-like

PDR1

Export Cd out of cell

[41, 42]

 107614075

−0.43

0.06

1.90a

2.45a

pleiotropic drug resistance protein 1-like

PDR1

Export Cd out of cell

[41, 42]

 107472005

1.18a

0.68

−0.24

−0.77

metal tolerance protein 9

MTP9

Export Cd out of cell

[38]

 107622321

1.24a

0.86

−0.38

− 0.81

metal tolerance protein 9

MTP9

Export Cd out of cell

[38]

 107614236

0.06

0.11

−1.00a

− 0.97

protein DETOXIFICATION 43

DTX43

Export Cd out of cell

[44, 45]

 107462988

0.91

− 0.55

1.49a

− 0.38

protein DETOXIFICATION 43-like X1

DTX43

Export Cd out of cell

[44, 45]

Tonoplast-localized transporters

 107481980

−0.06

−1.12

1.50a

0.36

ABC transporter C family member 15

ABCC15

Sequestrate Cd into vacuole

[21]

 107632015

−0.27

−0.61

1.38a

1.03

ABC transporter C family member 15

ABCC15

Sequestrate Cd into vacuole

[21]

 107496267

−0.18

−0.34

−2.11

− 2.83a

ABC transporter C family member 3

ABCC3

Sequestrate Cd into vacuole

[21]

 107496250

1.63

−1.25

− 0.86

−4.15a

ABC transporter C family member 3-like

ABCC3

Sequestrate Cd into vacuole

[21]

 107496160

1.65a

− 0.62

− 0.15

−2.52a

ABC transporter C family member 3-like

ABCC3

Sequestrate Cd into vacuole

[21]

 110262356

2.02a

− 0.29

−0.01

− 2.56a

ABC transporter C family member 3-like

ABCC3

Sequestrate Cd into vacuole

[21]

 107606454

1.58a

− 1.08

− 0.87

−3.66a

ABC transporter C family member 3-like

ABCC3

Sequestrate Cd into vacuole

[21]

 107496270

0.95

− 0.52

− 0.29

− 1.92a

ABC transporter C family member 3-like

ABCC3

Sequestrate Cd into vacuole

[21]

 107606407

0.34

− 1.08

−0.99

−3.49a

ABC transporter C family member 3-like

ABCC3

Sequestrate Cd into vacuole

[21]

 107630594

−0.05

0.74

4.48a

5.84a

ABC transporter C family member 4 X3

ABCC4

Sequestrate Cd into vacuole

[36]

 107466097

−0.26

−0.10

3.46a

3.94a

ABC transporter C family member 4 X3

ABCC4

Sequestrate Cd into vacuole

[36]

 107475935

0.83

−0.28

−0.37

−1.55a

ABC transporter C family member 4-like

ABCC4

Sequestrate Cd into vacuole

[36]

 107626139

0.88

−0.33a

− 0.26

− 1.55a

ABC transporter C family member 4-like

ABCC4

Sequestrate Cd into vacuole

[36]

 107636396

0.78

0.54

2.70a

2.42a

metal tolerance protein 4

MTP4

Sequestrate Cd into vacuole

[37]

Endomembrane-localized transporters

 107461527

1.33a

1.14

−0.03

− 0.25

zinc transporter 1

ZIP1

Sequestrate Cd into vesicles

[28]

 107462023

1.37a

0.33

0.89

− 0.21

zinc transporter 11

ZIP11

Sequestrate Cd into vesicles

[28]

 107617536

1.55a

0.93

0.97

0.33

zinc transporter 11

ZIP11

Sequestrate Cd into vesicles

[28]

 107618045

0.79

1.25a

−0.65

− 0.25

metal transporter Nramp6

Nramp6

Sequestrate Cd into vesicles

[35]

  1. aThe gene differentially expressed between the two groups. bFunction analysis of DEGs was based on references listed in the same row