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Table 1 Illumina sequencing data and results of de novo assembly

From: Comparative Transcriptome Analysis between Fertile and CMS Flower Buds in Wucai (Brassica campestris L.)

 

Sterile

Fertile

Total

Reads

 Clean reads

52,606,810

52,936,673

 

 Q20 (%)

96.61

97.29

 

 Q30 (%)

92.53

94.27

 

 GC content (%)

45.89

45.65

 

Contig

 Total number

  

117,332

 Total length (nt)

  

105,669,013

 Mean length (nt)

  

901

 N50 (nt)

  

1415

Unigene

 Total number

  

80,851

 Total length (nt)

  

85,236,698

 Mean length (nt)

  

1054

 N50 (nt)

  

1586

 Distinct clusters

  

43,191

 Distinct singletons

  

37,660