Table 1 Summary statistics for walking catfish (Clarias batrachus) genome sequencing, assembly and annotation
From: Genome sequence of walking catfish (Clarias batrachus) provides insights into terrestrial adaptation
Genome sequencing | ||||
Library | # of reads | Read length | Trimmed data | Genome coverage |
Paired-end 180 bp | 426 M | 100 bp | 39.2 Gb | 46X |
Mate-pair 3 kb | 483 M | 100 bp | 32.1 Gb | 38X |
Genome assembly | ||||
Total | N50 | Longest | Assembled size | |
Contigs | 87,962 | 19.0 kb | 194 kb | 747.7 Mb |
Scaffolds | 10,041 | 361.2 kb | 2843 kb | 821.8 Mb |
Genome annotation | ||||
Number of genes | Repetitive elements content | |||
22,914 | 30.3% | |||