Skip to main content

Table 2 Functional and Classical Pseudogenes in A. ovis

From: The Anaplasma ovis genome reveals a high proportion of pseudogenes

Ψa     Classical Ψ Functional Gene
Locus ID name Lengthb Functional Ψ frameshift truncated Locus ID Length
AOV_00155 msp2Ψ1 336 X    msp2 AOV_04300 1215
AOV_00600 msp2Ψ2 675 X   
AOV_03655 msp2Ψ3 750 X   
AOV_04515 msp2Ψ4 396 X   
AOV_04865 msp2Ψ5 414 X   
AOV_05215 msp2Ψ6 483 X   
AOV_04490 msp2Ψ7 579 X   
AOV_00040 msp3Ψ1 2043 X    msp3 AOV_03915 2426
AOV_00045 msp3Ψ2 1602 X   
AOV_00050 msp3Ψ3 1851 X   
AOV_00145 msp3Ψ5 2148 X   
AOV_00605 msp3Ψ6 1752 X   
AOV_03985 msp3Ψ8 2691 X   
AOV_04500 msp3Ψ9 2127 X   
AOV_04855 msp3Ψ10 1932 X   
AOV_00810 Hc 445   X   
AOV_01085 mutL 1892   X   
AOV_02395 mgtE 1348   X   
AOV_02655 fadB 1131   X   
AOV_02780 H 1690   X   
AOV_02875 lytB 919   X   
AOV_03945 H 2421   X   
AOV_00065 msp3Ψ4 438    X AOV_03915 2426
AOV_00115 omp14 573    X AOV_00035 1158
AOV_00515 sucD 223    X AOV_00660 885
AOV_01020 thiE 384    X AOV_01015 1026
AOV_01025 thiE 252    X
AOV_01820 msp1a 1611    X AOV_01835 2175
AOV_01970 infB 387    X AOV_02590 2502
AOV_01975 infB 702    X
AOV_02035 pccB 2035    X AOV_02715 1533
AOV_02120 purA 195    X AOV_03080 1281
AOV_02180 purA 195    X
AOV_02195 trxB2 228    X AOV_02205 1023
AOV_02200 trxB2 669    X
AOV_02415 pepA 1158    X AOV_03525 1497
AOV_02440 pepA 540    X
AOV_02835 lpdA 420    X AOV_02845 1416
AOV_03085 ObgE 747    X AOV_02115 1044
AOV_03660 msp3Ψ7 444    X AOV_03915 2426
AOV_04305 virB2a 342    X several \( \overline{x} \) =378
AOV_04495 virB2a 318    X
AOV_04995 omp6 516    X AOV_04980 1179
AOV_05010 H 333    X  
  1. aΨ = pseudogene
  2. bLength is given in base pairs
  3. cH = hypothetical