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Table 2 Functional and Classical Pseudogenes in A. ovis

From: The Anaplasma ovis genome reveals a high proportion of pseudogenes

Ψa

   

Classical Ψ

Functional Gene

Locus ID

name

Lengthb

Functional Ψ

frameshift

truncated

Locus ID

Length

AOV_00155

msp2Ψ1

336

X

  

msp2 AOV_04300

1215

AOV_00600

msp2Ψ2

675

X

  

AOV_03655

msp2Ψ3

750

X

  

AOV_04515

msp2Ψ4

396

X

  

AOV_04865

msp2Ψ5

414

X

  

AOV_05215

msp2Ψ6

483

X

  

AOV_04490

msp2Ψ7

579

X

  

AOV_00040

msp3Ψ1

2043

X

  

msp3 AOV_03915

2426

AOV_00045

msp3Ψ2

1602

X

  

AOV_00050

msp3Ψ3

1851

X

  

AOV_00145

msp3Ψ5

2148

X

  

AOV_00605

msp3Ψ6

1752

X

  

AOV_03985

msp3Ψ8

2691

X

  

AOV_04500

msp3Ψ9

2127

X

  

AOV_04855

msp3Ψ10

1932

X

  

AOV_00810

Hc

445

 

X

 

 

AOV_01085

mutL

1892

 

X

 

 

AOV_02395

mgtE

1348

 

X

 

 

AOV_02655

fadB

1131

 

X

 

 

AOV_02780

H

1690

 

X

 

 

AOV_02875

lytB

919

 

X

 

 

AOV_03945

H

2421

 

X

 

 

AOV_00065

msp3Ψ4

438

  

X

AOV_03915

2426

AOV_00115

omp14

573

  

X

AOV_00035

1158

AOV_00515

sucD

223

  

X

AOV_00660

885

AOV_01020

thiE

384

  

X

AOV_01015

1026

AOV_01025

thiE

252

  

X

AOV_01820

msp1a

1611

  

X

AOV_01835

2175

AOV_01970

infB

387

  

X

AOV_02590

2502

AOV_01975

infB

702

  

X

AOV_02035

pccB

2035

  

X

AOV_02715

1533

AOV_02120

purA

195

  

X

AOV_03080

1281

AOV_02180

purA

195

  

X

AOV_02195

trxB2

228

  

X

AOV_02205

1023

AOV_02200

trxB2

669

  

X

AOV_02415

pepA

1158

  

X

AOV_03525

1497

AOV_02440

pepA

540

  

X

AOV_02835

lpdA

420

  

X

AOV_02845

1416

AOV_03085

ObgE

747

  

X

AOV_02115

1044

AOV_03660

msp3Ψ7

444

  

X

AOV_03915

2426

AOV_04305

virB2a

342

  

X

several

\( \overline{x} \) =378

AOV_04495

virB2a

318

  

X

AOV_04995

omp6

516

  

X

AOV_04980

1179

AOV_05010

H

333

  

X

 
  1. aΨ = pseudogene
  2. bLength is given in base pairs
  3. cH = hypothetical