Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing

BMC Genomics

Table 1 Bacteria used in this study

Strain ID	Phylum	Genus	Species	% GC Content	Expected Genome Size (Mbps)
Ps JKS002128	Actinobacteria	Pseudonocardia	sp	73.12	6.60
Ps JKS002072	Actinobacteria	Pseudonocardia	sp	73.69	6.21
Ps JKS002056	Actinobacteria	Pseudonocardia	sp	73.31	6.54
Av JG3	Proteobacteria	Aeromonas	veronii	58.64	4.49
Av CIP107763^T	Proteobacteria	Aeromonas	culicicola ^a	58.80	4.34
Ah CA-13-1	Proteobacteria	Aeromonas	hydrophila	61.29	4.76
Fs ARS-166-14	Bacteroidetes	Flavobacterium	sp	31.61	3.31
Fc FC-100715-19	Bacteroidetes	Flavobacterium	columnare	31.59	3.32
Fc FC-08-1215-1	Bacteroidetes	Flavobacterium	columnare	31.56	3.31

^aCIP107763^T is the type strain for Aeromonas culicicola, which is a later subjective synonym of A. veronii

ISSN: 1471-2164