Table 2 Summary of MinION sequencing
Strain ID | Total Raw Reads | Total bases (Mbps) | Mean Length (bps) | Median Length (bps) | Max Length (bps) | N50 (bps) | Coverage (fold) | Total Reads After Filtering |
|---|---|---|---|---|---|---|---|---|
Ps JKS002128 | 119,358 | 499 | 9665 | 2510 | 244,268 | 7797 | 80 | 87,836 |
Ps JKS002072 | 135,898 | 311 | 2289 | 729 | 678,379 | 7142 | 50 | 70,035 |
Ps JKS002056 | 41,096 | 397 | 4184 | 6207 | 105,595 | 16,572 | 64 | 21,874 |
Av JG3 (run1) | 2718 | 25 | 7232 | 5710 | 85,387 | 17,143 | 5 | 34,473* |
Av JG3 (run2) | 42,301 | 306 | 9176 | 4807 | 90,470 | 11,741 | 63 | |
Av CIP107763T | 200,362 | 645 | 1629 | 1299 | 98,351 | 7545 | 135 | 110,391 |
Ah CA-13-1 | 136,486 | 222 | 1629 | 808 | 62,567 | 2840 | 46 | 65,195 |
Fs ARS-166-14 | 53,171 | 289 | 5442 | 1583 | 1,149,252 | 18,107 | 90 | 36,648 |
Fc FC-100715-19 (run1) | 39,376 | 146 | 3709 | 836 | 84,881 | 17,593 | 45 | 45,194* |
Fc FC-100715-19 (run2) | 31,121 | 187 | 5996 | 1137 | 157,214 | 26,227 | 58 | |
Fc FC-08-1215-1 | 39,938 | 236 | 5908 | 1252 | 106,525 | 22,063 | 74 | 26,486 |