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Table 1 Differentially expressed genes in co-culture vs mono-culture (FDR < 5%)

From: Transcriptional profiling of Pseudomonas aeruginosa and Staphylococcus aureus during in vitro co-culture

Condition Up-regulated Down-regulated log2FC > 1 log2FC < −1
CC vs PM 1726 1718 181 364
CC vs SM 761 730 189 261
  1. CC co-culture, PM P. aeruginosa mono-culture, SM S. aureus mono-culture
  2. FDR false discovery rate, FC fold-change