Table 3 Gene ontology based on differentially expressed predicted target genes
Category | GO term | Differentially expressed predicted target genes | Total genes | |||
|---|---|---|---|---|---|---|
DY2 | DY5 | DR2 | DR5 | |||
Cellular component | extracellular region | 1 | 1 | 6 | 3 | 974 |
cell | 35 | 33 | 85 | 85 | 24,549 | |
membrane | 18 | 17 | 29 | 36 | 9992 | |
cell junction | 0 | 1 | 2 | 2 | 385 | |
macromolecular complex | 4 | 5 | 14 | 16 | 3200 | |
organelle | 30 | 31 | 79 | 80 | 21,904 | |
organelle part | 4 | 8 | 20 | 22 | 4646 | |
membrane part | 9 | 5 | 9 | 11 | 4082 | |
cell part | 35 | 33 | 85 | 85 | 24,618 | |
Molecular function | nucleic acid binding transcription factor activity | 3 | 5 | 11 | 10 | 1052 |
catalytic activity | 20 | 12 | 39 | 40 | 17,825 | |
receptor activity | 0 | 0 | 1 | 1 | 222 | |
structural molecule activity | 0 | 1 | 3 | 6 | 753 | |
transporter activity | 3 | 2 | 3 | 2 | 1876 | |
binding | 25 | 26 | 57 | 53 | 20,072 | |
electron carrier activity | 0 | 0 | 0 | 4 | 834 | |
antioxidant activity | 0 | 1 | 0 | 1 | 370 | |
enzyme regulator activity | 1 | 0 | 1 | 0 | 344 | |
molecular transducer activity | 0 | 0 | 1 | 1 | 456 | |
Biological process | reproduction | 1 | 1 | 0 | 1 | 503 |
immune system process | 2 | 3 | 2 | 4 | 454 | |
metabolic process | 21 | 19 | 50 | 56 | 21,790 | |
cellular process | 22 | 23 | 60 | 62 | 19,163 | |
reproductive process | 3 | 3 | 7 | 9 | 1722 | |
signaling | 2 | 1 | 8 | 8 | 1423 | |
multicellular organismal process | 6 | 4 | 14 | 15 | 2556 | |
developmental process | 8 | 5 | 16 | 19 | 3341 | |
growth | 2 | 1 | 5 | 4 | 595 | |
single-organism process | 21 | 18 | 47 | 49 | 14,355 | |
rhythmic process | 0 | 1 | 0 | 0 | 59 | |
response to stimulus | 12 | 8 | 27 | 30 | 7834 | |
localization | 7 | 9 | 19 | 14 | 4192 | |
multi-organism process | 1 | 2 | 4 | 6 | 1376 | |
biological regulation | 16 | 12 | 34 | 35 | 6552 | |
cellular component organization or biogenesis | 6 | 3 | 14 | 12 | 3785 | |