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Table 3 Gene ontology based on differentially expressed predicted target genes

From: A dynamic degradome landscape on miRNAs and their predicted targets in sugarcane caused by Sporisorium scitamineum stress

Category GO term Differentially expressed predicted target genes Total genes
DY2 DY5 DR2 DR5
Cellular component extracellular region 1 1 6 3 974
cell 35 33 85 85 24,549
membrane 18 17 29 36 9992
cell junction 0 1 2 2 385
macromolecular complex 4 5 14 16 3200
organelle 30 31 79 80 21,904
organelle part 4 8 20 22 4646
membrane part 9 5 9 11 4082
cell part 35 33 85 85 24,618
Molecular function nucleic acid binding transcription factor activity 3 5 11 10 1052
catalytic activity 20 12 39 40 17,825
receptor activity 0 0 1 1 222
structural molecule activity 0 1 3 6 753
transporter activity 3 2 3 2 1876
binding 25 26 57 53 20,072
electron carrier activity 0 0 0 4 834
antioxidant activity 0 1 0 1 370
enzyme regulator activity 1 0 1 0 344
molecular transducer activity 0 0 1 1 456
Biological process reproduction 1 1 0 1 503
immune system process 2 3 2 4 454
metabolic process 21 19 50 56 21,790
cellular process 22 23 60 62 19,163
reproductive process 3 3 7 9 1722
signaling 2 1 8 8 1423
multicellular organismal process 6 4 14 15 2556
developmental process 8 5 16 19 3341
growth 2 1 5 4 595
single-organism process 21 18 47 49 14,355
rhythmic process 0 1 0 0 59
response to stimulus 12 8 27 30 7834
localization 7 9 19 14 4192
multi-organism process 1 2 4 6 1376
biological regulation 16 12 34 35 6552
cellular component organization or biogenesis 6 3 14 12 3785
  1. DY2 and DY5 represent the differentially expressed predicted target genes at 2 and 5 d after YC05–179 was inoculated with Sporisorium scitamineum, whereas DR2 and DR5 represent the differentially expressed predicted target genes at 2 and 5 d after ROC22 was inoculated S. scitamineum. YC05–179, smut-resistant genotype; ROC22, smut-susceptible genotype