Skip to main content

Table 4 KEGG enrichment results of differentially expressed predicted target genes in YC05–179 and ROC22 inoculated with Sporisorium scitamineum for 2 and 5 d

From: A dynamic degradome landscape on miRNAs and their predicted targets in sugarcane caused by Sporisorium scitamineum stress

Library Kegg_pathway ko_id Cluter_frequency P-value Corrected_P-value Enrichment_factor
DY2 Plant hormone signal transduction ko04075 2 out of 9, 22.22% 0.071009 0.710085 0.22
Ubiquinone and other terpenoid-quinone biosynthesis ko00130 1 out of 9, 11.11% 0.071806 0.71806 0.07
Glycerolipid metabolism ko00561 1 out of 9, 11.11% 0.126198 1 0.13
Photosynthesis ko00195 1 out of 9, 11.11% 0.137578 1 0.15
Arginine and proline metabolism ko00330 1 out of 9, 11.11% 0.199175 1 0.22
Ubiquitin mediated proteolysis ko04120 1 out of 9, 11.11% 0.213623 1 0.24
Plant-pathogen interaction ko04626 1 out of 9, 11.11% 0.235498 1 0.26
Cysteine and methionine metabolism ko00270 1 out of 9, 11.11% 0.236767 1 0.27
Oxidative phosphorylation ko00190 1 out of 9, 11.11% 0.313078 1 0.37
RNA transport ko03013 1 out of 9, 11.11% 0.371941 1 0.45
SNARE interactions in vesicular transport ko04130 1 out of 10, 10% 0.055905 0.670858 0.06
DY5 Plant hormone signal transduction ko04075 2 out of 10, 20% 0.085911 1 0.25
Tryptophan metabolism ko00380 1 out of 10, 10% 0.089401 1 0.09
Pentose and glucuronate interconversions ko00040 1 out of 10, 10% 0.092691 1 0.10
Glycerolipid metabolism ko00561 1 out of 10, 10% 0.139209 1 0.15
Photosynthesis ko00195 1 out of 10, 10% 0.151658 1 0.16
Fructose and mannose metabolism ko00051 1 out of 10, 10% 0.154745 1 0.17
Peroxisome ko04146 1 out of 10, 10% 0.201316 1 0.22
Ubiquitin mediated proteolysis ko04120 1 out of 10, 10% 0.234362 1 0.26
Plant-pathogen interaction ko04626 1 out of 10, 10% 0.257991 1 0.29
RNA transport ko03013 1 out of 10, 10% 0.403603 1 0.50
Ribosome ko03010 1 out of 10, 10% 0.544618 1 0.76
DR2 Plant hormone signal transduction ko04075 4 out of 24, 16.67% 0.029416 0.705974 0.30
Phenylalanine, tyrosine and tryptophan biosynthesis ko00400 2 out of 24, 8.33% 0.029491 0.707793 0.14
Photosynthesis ko00195 2 out of 24, 8.33% 0.05751 1 0.20
Histidine metabolism ko00340 1 out of 24, 4.17% 0.117722 1 0.12
SNARE interactions in vesicular transport ko04130 1 out of 24, 4.17% 0.129112 1 0.14
Ubiquitin mediated proteolysis ko04120 2 out of 24, 8.33% 0.13054 1 0.32
Cysteine and methionine metabolism ko00270 2 out of 24, 8.33% 0.157229 1 0.35
Fatty acid biosynthesis ko00061 1 out of 24, 4.17% 0.204988 1 0.23
Pentose and glucuronate interconversions ko00040 1 out of 24, 4.17% 0.208438 1 0.23
Porphyrin and chlorophyll metabolism ko00860 1 out of 24, 4.17% 0.222097 1 0.25
Ascorbate and aldarate metabolism ko00053 1 out of 24, 4.17% 0.232192 1 0.26
Oxidative phosphorylation ko00190 2 out of 24, 8.33% 0.256669 1 0.49
Glycine, serine and threonine metabolism ko00260 1 out of 24, 4.17% 0.283948 1 0.33
Pentose phosphate pathway ko00030 1 out of 24, 4.17% 0.290177 1 0.34
Fructose and mannose metabolism ko00051 1 out of 24, 4.17% 0.332351 1 0.40
Arginine and proline metabolism ko00330 1 out of 24, 4.17% 0.447393 1 0.58
Phagosome ko04145 1 out of 24, 4.17% 0.454667 1 0.60
Ribosome biogenesis in eukaryotes ko03008 1 out of 24, 4.17% 0.478256 1 0.64
Amino sugar and nucleotide sugar metabolism ko00520 1 out of 24, 4.17% 0.478256 1 0.64
Carbon fixation in photosynthetic organisms ko00710 1 out of 24, 4.17% 0.507463 1 0.70
Starch and sucrose metabolism ko00500 1 out of 24, 4.17% 0.513977 1 0.71
Ribosome ko03010 2 out of 24, 8.33% 0.551296 1 0.91
Glycolysis / Gluconeogenesis ko00010 1 out of 24, 4.17% 0.636432 1 0.99
Protein processing in endoplasmic reticulum ko04141 1 out of 24, 4.17% 0.67661 1 1.10
DR5 Photosynthesis ko00195 3 out of 24, 12.5% 0.006618 0.132362 0.13
Plant hormone signal transduction ko04075 4 out of 24, 16.67% 0.029416 0.588312 0.30
Ribosome ko03010 4 out of 24, 16.67% 0.10279 1 0.45
Selenocompound metabolism ko00450 1 out of 24, 4.17% 0.106189 1 0.11
Histidine metabolism ko00340 1 out of 24, 4.17% 0.117722 1 0.12
Ubiquitin mediated proteolysis ko04120 2 out of 24, 8.33% 0.13054 1 0.32
Cysteine and methionine metabolism ko00270 2 out of 24, 8.33% 0.157229 1 0.35
6--Sulfur metabolism ko00920 1 out of 24, 4.17% 0.169683 1 0.18
Ubiquinone and other terpenoid-quinone biosynthesis ko00130 1 out of 24, 4.17% 0.180429 1 0.20
Tryptophan metabolism ko00380 1 out of 24, 4.17% 0.201523 1 0.22
Pentose and glucuronate interconversions ko00040 1 out of 24, 4.17% 0.208438 1 0.23
Phenylalanine, tyrosine and tryptophan biosynthesis ko00400 1 out of 24, 4.17% 0.238852 1 0.27
Oxidative phosphorylation ko00190 2 out of 24, 8.33% 0.256669 1 0.49
Glycine, serine and threonine metabolism ko00260 1 out of 24, 4.17% 0.283948 1 0.33
Fructose and mannose metabolism ko00051 1 out of 24, 4.17% 0.332351 1 0.40
Peroxisome ko04146 1 out of 24, 4.17% 0.417358 1 0.53
Arginine and proline metabolism ko00330 1 out of 24, 4.17% 0.447393 1 0.58
Phagosome ko04145 1 out of 24, 4.17% 0.454667 1 0.60
Purine metabolism ko00230 1 out of 24, 4.17% 0.644512 1 1.01
Protein processing in endoplasmic reticulum ko04141 1 out of 24, 4.17% 0.67661 1 1.10
  1. DY2 and DY5 represent the differentially expressed predicted target genes at 2 d and 5 d after YC05–179 was inoculated with S. scitamineum, whereas DR2 and DR5 represent the differentially expressed predicted target genes at 2 d and 5 d after ROC22 was inoculated S. scitamineum. YC05–179, smut-resistant genotype; ROC22, smut-susceptible genotype
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us