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Table 5 Genes Oppositely Regulated by Circadian Misalignment and Aging

From: Chronic circadian misalignment results in reduced longevity and large-scale changes in gene expression in Drosophila

gene name

week 3 log2FC

week 3 p-adj

aging log2FC

aging p-adj

function

--Downregulated with CCM; Upregulated with Aging--

 CG3739

−0.90

3.70E-13

0.20

2.38E-01

dipeptidyl-peptidase activity; serine-type peptidase activity

 CG18609

−0.80

7.72E-13

0.56

4.94E-04

fatty acid elongase activity

 CG34180

−0.75

1.46E-03

0.50

1.04E-01

unknown

 CG10960

−0.67

1.49E-06

0.51

4.81E-03

carbohydrate:proton symporter activity; glucose transmembrane transporter activity

 CG11741

−0.56

4.57E-02

0.67

3.26E-02

unknown

 b6

−0.55

4.23E-02

0.38

1.79E-01

unknown

 Uro

−0.54

2.75E-02

0.57

3.79E-02

urate oxidase activity

 rost

−0.51

2.96E-02

0.35

1.14E-01

unknown

 CG4607

−0.48

7.35E-03

0.58

1.96E-04

carbohydrate:proton symporter activity; glucose transmembrane transporter activity

 CG15096

−0.46

9.90E-02

0.48

4.42E-02

transmembrane transporter activity

 CG9459

−0.35

8.04E-02

0.71

1.34E-03

fatty acid elongase activity

 CG14464

−0.33

9.77E-02

0.46

1.09E-02

unknown

--Upregulated with CCM; Downregulated with Aging--

 CG5804

0.51

7.70E-03

−0.36

1.68E-01

fatty-acyl-CoA binding

 CG5767

0.45

4.87E-02

−0.65

6.97E-03

unknown

 CG34330

0.41

3.14E-02

−0.22

2.57E-01

unknown

 AsnS

0.37

7.58E-02

−0.36

8.08E-02

asparagine synthase (glutamine-hydrolyzing) activity; protein homodimerization activity

  1. log2FC determined by DEseq2 using shrinkage estimation. p-adj is the False Discovery Rate (FDR) as determined by Benjamini-Hochberg correction. Italicized genes were also significantly downregulated following 2 weeks of CCM exposure.