Table 2 Non-synonymous SNPs associated with fiber length
Gene | Position | Ref | Ref aa | REF, n | Ref, mm | Alt | Alt aa | ALT, n | Alt, mm | P-value |
|---|---|---|---|---|---|---|---|---|---|---|
Gh_A07G1744 | 71,156,748 | G | V | 460 | 28.4 | A | M | 99 | 28.9 | 1.4E-05 |
Gh_A07G1769 | 72,203,768 | T | K | 475 | 28.4 | C | E | 84 | 29.0 | 3.4E-06 |
Gh_A07G1793 | 72,731,159 | A | E | 427 | 28.3 | T | D | 132 | 28.8 | 7.1E-05 |
Gh_A08G1774 | 97,828,015 | A | K | 451 | 28.6 | T | M | 108 | 28.0 | 4.0E-06 |
Gh_A08G1775 | 97,852,975 | C | R | 446 | 28.6 | G | G | 113 | 28.0 | 4.6E-07 |
Gh_A11G0352 | 3,230,793 | T | N | 437 | 28.6 | A | Y | 122 | 28.0 | 2.6E-07 |
Gh_D02G0366 | 4,864,217 | G | A | 487 | 28.4 | C | G | 72 | 28.9 | 2.9E-04 |
Gh_D05G0610 | 4,932,816 | T | R | 362 | 28.7 | C | K | 198 | 28.1 | 6.8E-08 |
Gh_D11G1928 | 24,009,361 | G | R | 495 | 28.5 | A | C | 63 | 27.8 | 5.3E-06 |
Gh_D11G1929 | 24,030,087 | G | E | 505 | 28.5 | T | D | 54 | 27.8 | 1.2E-05 |
Gh_D11G1931 | 24,065,685 | A | K | 499 | 28.5 | G | R | 60 | 27.8 | 1.0E-06 |
Gh_D12G0592 | 11,043,241 | T | V | 514 | 28.5 | C | I | 45 | 27.7 | 1.3E-05 |