Conserved regulation of RNA processing in somatic cell reprogramming

BMC Genomics

Table 1 Publicly available RNA-Seq data sets analyzed in this study

Id	Accession	Organism	Cell types	Reference
A	SRP011318	Mouse	Adipose progenitor cells, fibroblasts, hematopoietic progenitor cells, iPSCs	[95]
B	SRP016568	Human	Fibroblasts, iPSCs	[21]
C	SRP026281	Mouse	Fibroblasts, iPSCs (chemical)	[96]
D	SRP033561	Mouse	Fibroblasts, iPSCs	[97]
E	SRP033569	Human	Fibroblasts, iPSCs (retrovirus), iPSCs (Sendai virus)	[98]
F	SRP033700	Mouse	Fibroblasts, iPSCs	[99]
G	SRP045688	Mouse	Fibroblasts, iPSCs	[100]
H	SRP045999	Chimpanzee, Human	Fibroblasts, iPSCs, lymphoblastoids (human only)	[101]
I	SRP049340	Human	hiF, hiF-T, iPSCs	[28]
J	SRP052014	Mouse	iPSCs, spermatogonial stem cells	[102]
K	SRP056571	Mouse	Fibroblasts, iPSCs	[103]
L	SRP059670	Mouse	Fibroblasts, iPSCs	[15]
M	SRP063867	Human	Fibroblasts, iPSCs	[104]
N	SRP064357	Mouse	Fibroblasts, iPSCs (chemical)	[105]

The columns indicate NCBI Sequence Read Archive (SRA) accession numbers, the organism or organisms and cell types from which samples were prepared, and a reference to the study for which the data was originally generated

ISSN: 1471-2164