Table 1 Summary of sequencing and mapping results
Samples (−average) | Raw reads (Mb) | Clean reads (Mb) | Clean bases (Gb) | Clean reads Q20 (%) | Clean reads ratio (%) | Mapping ratio (%) | Uniquely mapping ratio (%) |
|---|---|---|---|---|---|---|---|
YD1 | 57.15 | 45.19 | 6.78 | 97.88 | 79.06 | 84.49 | 66.38 |
YD2 | 57.15 | 44.87 | 6.73 | 97.86 | 78.51 | 83.90 | 65.93 |
YD3 | 64.78 | 44.09 | 6.61 | 96.88 | 68.06 | 83.63 | 60.43 |
YD-average | 59.69 | 44.72 | 6.71 | 97.54 | 75.21 | 84.01 | 64.25 |
Nic1 | 55.52 | 44.78 | 6.72 | 97.91 | 80.66 | 87.42 | 58.59 |
Nic2 | 60.18 | 44.04 | 6.61 | 96.82 | 73.18 | 87.04 | 53.83 |
Nic3 | 61.80 | 44.15 | 6.62 | 96.87 | 71.43 | 86.20 | 53.67 |
Nic-average | 59.17 | 44.32 | 6.65 | 97.20 | 75.09 | 86.89 | 55.36 |