Table 1 SWEET family genes in B. oleracea and corresponding orthologs in A. thaliana
Group | tPCK Chr | CCB | Arabidopsis thaliana | Brassica oleracea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gene name | Gene ID | ORF (bp) | PL (aa) | Gene name | Gene ID | Chromosome | Subgenome | ORF (bp) | PL (aa) | MW (kD) | pI | Number of MtN3_slv | |||
Clade I | tPCK1 | B | AtSWEET1 | AT1G21460 | 744 | 247 | BoSWEET1a | Bol012680 | Scaffold000195_P1 | MF1 | 741 | 246 | 27.805 | 9.2 | 2 |
BoSWEET1b | Bol009655 | C05 | LF | 756 | 251 | 27.111 | 9.38 | 2 | |||||||
tPCK2 | F | AtSWEET2 | AT3G14770 | 711 | 236 | BoSWEET2a | Bol002799 | Scaffold000374 | LF | 711 | 236 | 26.683 | 8.95 | 2 | |
BoSWEET2b | Bol011848 | Scaffold000206 | MF1 | 594 | 197 | 22.330 | 8.58 | 2 | |||||||
tPCK5 | W | AtSWEET3 | AT5G53190 | 792 | 263 | BoSWEET3a | Bol017165 | C07 | MF1 | 780 | 259 | 29.239 | 8.6 | 2 | |
BoSWEET3b | Bol030288 | C09 | LF | 648 | 215 | 24.056 | 7.64 | 1 | |||||||
Clade II | tPCK7 | L | AtSWEET4 | AT3G28007 | 756 | 251 | BoSWEET4a | Bol042944 | C07 | LF | 747 | 248 | 27.479 | 9.07 | 2 |
BoSWEET4b | Bol031203 | C02 | MF1 | 738 | 245 | 27.323 | 8.78 | 2 | |||||||
tPCK7 | X | AtSWEET5 | AT5G62850 | 723 | 240 | BoSWEET5a | Bol019179 | Scaffold000133 | MF1 | 636 | 211 | 24.316 | 8.92 | 2 | |
BoSWEET5b | Bol019426 | C06 | LF | 738 | 245 | 27.918 | 9.3 | 2 | |||||||
BoSWEET5c | Bol020702 | Scaffold000121_P2 | MF2 | 1428 | 475 | 53.510 | 8.36 | 4 | |||||||
tPCK6 | E | AtSWEET6 | AT1G66770 | 786 | 261 | / | / | / | / | / | / | / | / | / | |
tPCK5 | P | AtSWEET7 | AT4G10850 | 777 | 258 | BoSWEET7a | Bol006816 | C09 | LF | 750 | 249 | 27.277 | 9.56 | 2 | |
BoSWEET7b | Bol025689 | C03 | MF1 | 444 | 147 | 16.200 | 7.78 | 1 | |||||||
tPCK4 | S | AtSWEET8 | AT5G40260 | 720 | 239 | BoSWEET8 | Bol012888 | Scaffold000192 | LF | 717 | 238 | 26.670 | 8.9 | 2 | |
Clade III | tPCK3 | J | AtSWEET9 | AT2G39060 | 777 | 258 | BoSWEET9 | Bol020406 | C03 | MF2 | 531 | 176 | 19.551 | 7.85 | 1 |
tPCK5 | W | AtSWEET10 | AT5G50790 | 870 | 289 | BoSWEET10 | Bol001620 | Scaffold000431 | MF2 | 870 | 289 | 33.058 | 9.2 | 2 | |
tPCK6 | M | AtSWEET11 | AT3G48740 | 870 | 289 | BoSWEET11a | Bol003199 | Scaffold000361 | MF1 | 534 | 177 | 19.181 | 8.68 | 1 | |
BoSWEET11b | Bol037413 | C08 | LF | 870 | 289 | 31.945 | 9.32 | 2 | |||||||
BoSWEET11c | Bol002048 | Scaffold000407 | MF2 | 534 | 177 | 19.208 | 8.98 | 1 | |||||||
tPCK7 | Q | AtSWEET12 | AT5G23660 | 858 | 285 | BoSWEET12a | Bol036230 | C09 | MF2 | 834 | 277 | 30.623 | 9.14 | 2 | |
BoSWEET12b | Bol017126 | C07 | LF | 867 | 288 | 31.782 | 9.07 | 2 | |||||||
tPCK5 | Â | AtSWEET13 | AT5G50800 | 885 | 294 | BoSWEET13 | Bol045233 | C06 | / | 600 | 199 | 22.122 | 8.49 | 1 | |
tPCK4 | U | AtSWEET14 | AT4G25010 | 846 | 281 | BoSWEET14a | Bol002776 | Scaffold000375 | MF2 | 819 | 272 | 29.971 | 9.18 | 2 | |
BoSWEET14b | Bol039481 | C01 | LF | 822 | 273 | 30.114 | 9.2 | 2 | |||||||
BoSWEET14c | Bol042202 | C07 | MF1 | 612 | 203 | 22.429 | 9.12 | 1 | |||||||
tPCK5 | R | AtSWEET15 | AT5G13170 | 879 | 292 | BoSWEET15a | Bol034222 | C03 | MF2 | 705 | 234 | 26.232 | 6.58 | 2 | |
BoSWEET15b | Bol043455 | C09 | LF | 540 | 179 | 19.812 | 6.28 | 1 | |||||||
Clade IV | tPCK2 | F | AtSWEET16 | AT3G16690 | 693 | 230 | BoSWEET16a | Bol034791 | C01 | MF1 | 696 | 231 | 25.759 | 8.69 | 2 |
BoSWEET16b | Bol022976 | C03 | MF2 | 552 | 183 | 20.362 | 9.35 | 2 | |||||||
tPCK4 | T | AtSWEET17 | AT4G15920 | 726 | 241 | BoSWEET17 | Bol037218 | C07 | MF2 | 723 | 240 | 26.513 | 6.73 | 2 | |