Skip to main content

Table 3 Overview of proteins and transcripts differentially regulated between natural population and symbionts-depleted conditions and involved in main carbon metabolism pathways

From: Global host molecular perturbations upon in situ loss of bacterial endosymbionts in the deep-sea mussel Bathymodiolus azoricus assessed using proteomics and transcriptomics

ID

EC number

T1

T2

P

T

P

T

Pentose phosphate pathway

 Glucose-6- Phosphate dehydrogenase

1.1.1.49

–

/

–

/

 Transaldolase

2.2.1.2

–

/

–

/

 Transkelotase like protein 2

2.2.1.1

–

/

/

/

 Deoxyribose Phosphate aldolase

4.1.2.4

+

/

+

/

Glycolysis

 Phosphoglycerate kinase

2.7.2.3

–

–

/

/

 Pyruvate kinase

2.7.1.40

–

/

–

/

 Phosphoglucose isomerase

5.3.1.9

/

/

+

/

 Glyceraldehyde-3-Phosphate dehydrogenase

1.2.1.13

–

+

+

–

 Mannose-6-phosphate isomerase

5.3.1.8

+

/

/

/

 Pyruvate dehydrogenase

2.3.1.12

/

+

+

–

 Hexokinase type 2

2.7.1.1

/

/

/

–

TCA Cycle

 2-oxoglutarate dehydrogenase

2.3.1.61

–

–

/

/

 2-oxoglutarate/malate carrier protein

/

–

/

–

/

 Succinate dehydrogenase

1.3.5.1

–

–

–

/

 Malate dehydrogenase

1.1.1.37

/

–

–

–

 Isocitrate dehydrogenase

1.1.1.42

–

–

–

–

 Aconitate hydratase

4.2.1.3

/

–

–

/

 ATP citrate synthase

2.3.3.8

/

/

+

/

Others

 Glycerol-3- phosphate dehydrogenase

1.1.1.8

–

–

–

–

 Pyruvate carboxylase

6.4.1.1

/

–

/

–

  1. P Proteins, T Transcripts, +: up-regulated compared to the natural population, −: Down-regulated, /: No significant differences