Fig. 5
From: Large-scale 3D chromatin reconstruction from chromosomal contacts
Accuracy measurement by normalized RMSD, PCC and SRCC vs different numbers of loci. For structures with large number of loci, the SRCC and PCC is almost one, which indicated the reconstructed structures are close to the original structures. We stopped ChromSDE, and HSA computation beyond 500 loci due to the high runtime: a Poisson distribution-based contact maps; b Binary contact maps