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Table 3 The estimated values of K given the number of SNP residues and PDT levels

From: A secure SNP panel scheme using homomorphically encrypted K-mers without SNP calling on the user side

  N=10 20 30 40 50 60 70 80 90 100
PDT = 0 10 21 21 21 21 21 21 21 21 21
1 13 23 23 23 23 23 23 24 24 24
2 17 26 26 26 26 26 26 26 26 26
3 20 27 27 27 27 27 27 28 28 28
4 24 32 32 32 32 32 32 32 32 32
  1. PDT indicates mismatch tolerance and N indicates the panel size. The number inside of table is value of K, which is the minimal length of K-mer for the model. Usually, larger K requires longer running time and more resources. The table shows how the changes in PDT and N affect the value of K. The result indicates that K is positively correlated with both factors respectively