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Table 1 Evaluation of local structure preservation based on averaged values of IGP

From: TSEE: an elastic embedding method to visualize the dynamic gene expression patterns of time series single-cell RNA sequencing data

 

PCA

tSNE

EE

TSEE

HPE

0.7747

0.8900

0.8466

0.9407

Zebrafish

0.4757

0.8799

0.7127

0.8943