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Table 3 Quantitative Real-Time-PCR (qPCR) expression analysis of some drought-regulated genes in leaves of drought-stressed sweet orange (Citrus sinensis) grafted on ‘Rangpur’ lime and ‘Flying Dragon’ trifoliate orange

From: Rootstock-induced molecular responses associated with drought tolerance in sweet orange as revealed by RNA-Seq

ID citrus

Gene description

Log2 fold change (drought/control)

‘Rangpur’

‘Flying Dragon’

Cell wall metabolism

 Orange1.1g025810m

Expansin-Like B1

3.716

0.871

 Orange1.1g013402m

Polygalacturonase (pectinase)

0.539

−0.636

 Orange1.1g030669m

Arabinogalactan protein 1

1.406

−0.277

 Orange1.1g047288m

Pectinesterase inhibitor 6-like

−0.579

−2.101

 Orange1.1g029350m

Proline-Rich Protein 4

0.219

−2.826

 Orange1.1g009682m

Pectinesterase inhibitor 54-like

0.205

−2.439

 Orange1.1g025025m

Expansin A4

−1.552

0.272

 Orange1.1g007089m

β-Xylosidase 1

0.317

−1.833

 Orange1.1g011204m

Pectin lyase-1 like

−2.640

−3.699

Transcription factor

 Orange1.1g024111m

bHLH BEE 3-like

5.925

0.600

 Orange1.1g025097m

WRKY transcription factor 40

3.412

−0.785

 Orange1.1g021910m

NAC transcription factor 2

2.673

0.945

Receptor-like kinase

 Orange1.1 g031436

Wall-associated receptor kinase-like 8

−2.482

0.889

 Orange1.1 g026214

Wall-associated receptor kinase-like 2

1.386

−2.195

 Orange1.1 g041671

Wall-associated receptor kinase 2

−0.477

−1.276