Transcriptomic profiling of the flower scent biosynthesis pathway of Cymbidium faberi Rolfe and functional characterization of its jasmonic acid carboxyl methyltransferase gene

Table 3 Cis-acting elements in the CfJMT promoter predicted by PlantCARE

Site name	Organism	Position	Strand
AAGAA-motif	Avena sativa	1205	–
AAGAA-motif	Avena sativa	1353	–
ABRE	Arabidopsis thaliana	547	+
ABRE	Arabidopsis thaliana	1493	–
ARE	Zea mays	1420	–
ARE	Zea mays	1459	–
AuxRR-core	Nicotiana tabacum	166	–
Box 4	Petroselinum crispum	1377	–
Box 4	Petroselinum crispum	1385	–
Box I	Pisum sativum	1123	+
Box III	Pisum sativum	301	+
Box-w1	Petroselinum crispum	1080	–
C-box	Arabidopsis thaliana	215	+
CGTCA-motif	Hordeum vulgare	394	+
EIRE	Nicotiana tabacum	1487	+
ERE	Dianthus caryophyllus	1122	+
G-BOX	Antirrhinum majus	547	–
G-BOX	Pisum sativum	1493	–
G-BOX	Pisum sativum	1088	–
G-BOX	Daucus carota	547	+
G-BOX	Brassica napus	1492	–
G-BOX	Zea mays	1088	–
G-BOX	Arabidopsis thaliana	1493	–
GARE-motif	Brassica oleracea	235	+
GC-motif	Zea mays	500	–
GT1-motif	Avena sativa	753	+
GT1-motif	Arabidopsis thaliana	1346	+
Gap-box	Arabidopsis thaliana	1440	–
Gap-box	Arabidopsis thaliana	1479	–
HSE	Brassica oleracea	818	–
HSE	Brassica oleracea	1349	–
HSE	Brassica oleracea	1304	+
I-box	Flaveria trinervia	1261	+
LTR	Hordeum vulgare	105	–
LTR	Hordeum vulgare	908	–
MBS	Arabidopsis thaliana	277	–
MBSI	Petunia hybrida	1339	+
O2-site	Zea mays	118	+
Skn-1 motif	Oryza sativa	395	+
Skn-1 motif	Oryza sativa	405	–
Sp1	Zea mays	312	+
TATCCAT/C-motif	Oryza sativa	208	–
TC-rich repeats	Nicotiana tabacum	934	–
TGACG-motif	Hordeum vulgare	394	–
TGGCA-motif	Triticum aestivum	352	+
W box	Arabidopsis thaliana	1080	–

ISSN: 1471-2164