Table 2 Top 10 most strongly associated loci for marine maturation (MMAT)
From: Polygenic and sex specific architecture for two maturation traits in farmed Atlantic salmon
Ssa | SNP | Position | -LOG10(p-val) | Effect Size | % VG | Gene |
|---|---|---|---|---|---|---|
10 | AX-87354755 | 60,175,081 | 12.34 | −0.11 | 2.52 | magi2 |
11 | AX-96411005 | 81,521,399 | 6.84 | −0.07 | 2.64 | picalm |
9 | AX-87290803 | 113,217,513 | 5.47 | −0.06 | 6.36 | LOC106612812 |
4 | AX-87171059 | 21,354,256 | 5.27 | 0.12 | 13.93 | ctnna2 |
5 | AX-96304246 | 24,703,414 | 5.22 | 0.06 | 1.18 | rapgef2 |
9 | AX-87526812 | 112,774,492 | 5.15 | −0.07 | 0.01 | cldn4 |
9 | AX-87822666 | 113,017,965 | 5.15 | −0.07 | LD | caln1 |
9 | AX-96428686 | 119,632,095 | 5.00 | −0.05 | 0.27 | tsku |
1 | AX-87558959 | 154,144,608 | 5.00 | 0.12 | 3.11 | ser1 |
1 | AX-87477870 | 151,185,007 | 4.99 | −0.06 | 0.97 | nlrp12 |