Table 1 Characteristics of predicted miRNA-like loci
Genomic position | Name | Length | Reads | Strand | Mature miRNA-like | Mature miRNA-like length (nt) | Up-regulation |
|---|---|---|---|---|---|---|---|
scaffold_28:345427–345,528 | Locus_338 | 102 | 37,395 | – | UAAACACGAACUGUCCUAGU | 20 | No |
scaffold_28:346121–346,253 | Locus_339 | 133 | 2778 | – | UAAAUACCGCGUGACCUAGA | 20 | No |
scaffold_28:347535–347,650 | Locus_340 | 116 | 74,526 | – | UUAAAUAGAUGUUGAACUUGGUG | 23 | No |
scaffold_28:349765–349,990 | Locus_341 | 226 | 3636 | – | UUUAAAGAGUAGGUGUCCUGAUC | 23 | RM |
scaffold_28:350996–351,184 | Locus_342 | 189 | 9875 | – | UAAACACUGCUGUCCUAGUGG | 21 | RM |
scaffold_28:351831–351,938 | Locus_343 | 108 | 7174 | – | UUAAAUGGGGGGUGUACUG | 19 | No |
scaffold_28:353658–353,769 | Locus_345 | 112 | 62,117 | – | AAUUAAAGUGUGGCUGUCUUGGUG | 24 | No |
scaffold_81:287993–288,405 | Locus_818 | 413 | 17,160 | + | UGAGAGAUCUUUACUUGCAG | 20 | No |
scaffold_81:370577–371,186 | Locus_828 | 610 | 2143 | – | CGAGGAUCGAGAGCUUGCACGUCA | 24 | RM |
scaffold_245:162243–162,808 | Locus_1596 | 566 | 196 | – | UAACAGAAGUUGUUGGAUU | 19 | No |