Table 3 Properties of genome sequences of strains CFBP 7970, DSM 10026 and ATCC 35879
From: Identification of genetic relationships and subspecies signatures in Xylella fastidiosa
| Â | CFBP 7970a | DSM 10026b | ATCC 35879c |
|---|---|---|---|
Sequencing technology | Ilumina MiSeq | Shot gun | Illumina MiSeq |
Assembling method | Velvet SOAPdenovo SOAPGapCloser | Not available | CLC Genomic Workbench |
Genome size | 2,493,794 bp | 2,426,538 bp | 2,522,328 bp |
Number of contigs | 93 | 72 | 16 |
Minimal size of contigs | 500 bp | 1 kb | 1.2 kb |
Coverage | 968x | 416x | 1380x |